RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 HAS1Q92839 578 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 GPRASP2Q96D09 838 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 ABHD8Q96I13 439 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 DEFB118Q96PH6 123 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 MPHOSPH6Q99547 160 aaKnown RBP6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 TMEM60Q9H2L4 133 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 AGO4Q9HCK5 861 aaKnown RBP6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 HMX1Q9NP08 348 aaPredicted RBP6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 KCNH7Q9NS40 1196 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 DDX20Q9UHI6 824 aaKnown RBP6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 DDX25Q9UHL0 483 aaKnown RBP6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 PCDHB6Q9Y5E3 794 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 SYNRGQ9UMZ2 1314 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 DDX39AO00148 427 aaKnown RBP6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 FIBPO43427 364 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 ADAMTS4O75173 837 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 CCNE2O96020 404 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 ADH1CP00326 375 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 F13A1P00488 732 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 TIMP2P16035 220 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 EN2P19622 333 aaPredicted RBP6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 SP4Q02446 784 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 TTLL4Q14679 1199 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 IL17AQ16552 155 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 GNPTABQ3T906 1256 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 CELF3Q5SZQ8 465 aaKnown RBP6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 PPP4R3AQ6IN85 833 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 MOXD1Q6UVY6 613 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 TLK2Q86UE8 772 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 TNS4Q8IZW8 715 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 OR6J1Q8NGC5 347 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 U2AF1L4Q8WU68 220 aaKnown RBP6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 PPP1R13LQ8WUF5 828 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 AFG1LQ8WV93 481 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 SLC5A5Q92911 643 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 IPO9Q96P70 1041 aaKnown RBP6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 MTMR9Q96QG7 549 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 ZNF577Q9BSK1 485 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 UPF3AQ9H1J1 476 aaKnown RBP6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 KCNMB3Q9NPA1 279 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 XPNPEP3Q9NQH7 507 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 CLIC4Q9Y696 253 aa6.47□□□□□ -1.37
HERPUD2-204ENST00000426180 GSTTP1A0A1W2PQM5 241 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 IPO5O00410 1097 aaKnown RBP6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 DUSP11O75319 330 aaKnown RBP6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 PSMD10O75832 226 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 FARP2O94887 1054 aaPredicted RBP6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 SGPL1O95470 568 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 GH1P01241 217 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 TFRCP02786 760 aaKnown RBP6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 GJB1P08034 283 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 C6orf222P0C671 652 aaPredicted RBP6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 TGFB3P10600 412 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 RARBP10826 455 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 GCFC2P16383 781 aaKnown RBP6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 GJA8P48165 433 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 TRAPPC10P48553 1259 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 SOX10P56693 466 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 GJA9P57773 515 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 CEBPZQ03701 1054 aaKnown RBP6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 ARID5BQ14865 1188 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 LRRC41Q15345 812 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 KCNA10Q16322 511 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 HSDL1Q3SXM5 330 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 CCSAPQ6IQ19 270 aaPredicted RBP6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 KCNV1Q6PIU1 500 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 LYPD8Q6UX82 237 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 BRAPQ7Z569 592 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 DHX37Q8IY37 1157 aaKnown RBP6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 KLHDC9Q8NEP7 349 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 DIS3LQ8TF46 1054 aaKnown RBP6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 SPATA33Q96N06 139 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 USP28Q96RU2 1077 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 GPR20Q99678 358 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 SENP7Q9BQF6 1050 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 UNC45AQ9H3U1 944 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 TFIP11Q9UBB9 837 aaKnown RBP6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 VAV3Q9UKW4 847 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 OGDHLQ9ULD0 1010 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 NOL7Q9UMY1 257 aaKnown RBP6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 Q9Y3F1 56 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 NFASCO94856 1347 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 MCM3APO60318 1980 aa6.46□□□□□ -1.38
HERPUD2-204ENST00000426180 A6NJR5 290 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 CCDC85CA6NKD9 419 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 RBAK-RBAKDNI3L0D1 243 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 EML1O00423 815 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 NKRFO15226 690 aaKnown RBP eCLIP6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 MAFGO15525 162 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 CHMP2AO43633 222 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 NEMFO60524 1076 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 GAS7O60861 476 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 MMP3P08254 477 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 MYL3P08590 195 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 ZNF286BP0CG31 522 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 TXKP42681 527 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 ACTR2P61160 394 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 NKX3-2P78367 333 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 SETQ01105 290 aaPredicted RBP6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 DNM1Q05193 864 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms