RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 ATP8B4Q8TF62 1192 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 BRMS1Q9HCU9 246 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 PTPRSQ13332 1948 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 CYP3A7-CYP3A51PA0A087WV96 503 aa19.77■□□□□ 0.76
SLC6A1-202ENST00000425938 EDIL3O43854 480 aa19.77■□□□□ 0.76
SLC6A1-202ENST00000425938 DTNBO60941 627 aa19.77■□□□□ 0.76
SLC6A1-202ENST00000425938 TDP2O95551 362 aa19.77■□□□□ 0.76
SLC6A1-202ENST00000425938 CYP3A7P24462 503 aa19.77■□□□□ 0.76
SLC6A1-202ENST00000425938 PLEKHG4Q58EX7 1191 aa19.77■□□□□ 0.76
SLC6A1-202ENST00000425938 DBF4BQ8NFT6 615 aa19.77■□□□□ 0.76
SLC6A1-202ENST00000425938 DNAJB3Q8WWF6 145 aa19.77■□□□□ 0.76
SLC6A1-202ENST00000425938 SLC5A5Q92911 643 aa19.77■□□□□ 0.76
SLC6A1-202ENST00000425938 TEKT3Q9BXF9 490 aa19.77■□□□□ 0.76
SLC6A1-202ENST00000425938 GJB4Q9NTQ9 266 aa19.77■□□□□ 0.76
SLC6A1-202ENST00000425938 PCDHA2Q9Y5H9 948 aa19.77■□□□□ 0.76
SLC6A1-202ENST00000425938 CHD7Q9P2D1 2997 aa19.77■□□□□ 0.75
SLC6A1-202ENST00000425938 COL1A2P08123 1366 aa19.76■□□□□ 0.75
SLC6A1-202ENST00000425938 FDPSP14324 419 aaKnown RBP19.76■□□□□ 0.75
SLC6A1-202ENST00000425938 KRT2P35908 639 aa19.76■□□□□ 0.75
SLC6A1-202ENST00000425938 TRIM29Q14134 588 aa19.76■□□□□ 0.75
SLC6A1-202ENST00000425938 LETM2Q2VYF4 491 aa19.76■□□□□ 0.75
SLC6A1-202ENST00000425938 NEK8Q86SG6 692 aa19.76■□□□□ 0.75
SLC6A1-202ENST00000425938 ZBED2Q9BTP6 218 aa19.76■□□□□ 0.75
SLC6A1-202ENST00000425938 FAM49AQ9H0Q0 323 aaPredicted RBP19.76■□□□□ 0.75
SLC6A1-202ENST00000425938 UPF2Q9HAU5 1272 aaKnown RBP19.76■□□□□ 0.75
SLC6A1-202ENST00000425938 DISC1Q9NRI5 854 aa19.76■□□□□ 0.75
SLC6A1-202ENST00000425938 DDX25Q9UHL0 483 aaKnown RBP19.76■□□□□ 0.75
SLC6A1-202ENST00000425938 LOXHD1Q8IVV2 1947 aa19.76■□□□□ 0.75
SLC6A1-202ENST00000425938 M0QZ92 97 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 TLL1O43897 1013 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 JAK2O60674 1132 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 CHRNA1P02708 482 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 CA3P07451 260 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 GCFC2P16383 781 aaKnown RBP19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 SFNP31947 248 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 JAK3P52333 1124 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 DEFB103AP81534 67 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 TCTN1Q2MV58 587 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 ZNF484Q5JVG2 852 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 IER5Q5VY09 327 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 PIK3AP1Q6ZUJ8 805 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 TRAPPC12Q8WVT3 735 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 BBXQ8WY36 941 aaPredicted RBP19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 APBB2Q92870 758 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 FAM167AQ96KS9 214 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 ZSCAN31Q96LW9 406 aaPredicted RBP19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 MBOAT7Q96N66 472 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 NAP1L4Q99733 375 aaKnown RBP19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 GABBR1Q9UBS5 961 aa19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 MAFBQ9Y5Q3 323 aaPredicted RBP19.75■□□□□ 0.75
SLC6A1-202ENST00000425938 SIP14410 1827 aa19.74■□□□□ 0.75
SLC6A1-202ENST00000425938 CHMP2AO43633 222 aa19.74■□□□□ 0.75
SLC6A1-202ENST00000425938 AMHP03971 560 aa19.74■□□□□ 0.75
SLC6A1-202ENST00000425938 RBM25P49756 843 aaKnown RBP19.74■□□□□ 0.75
SLC6A1-202ENST00000425938 MRPS6P82932 125 aaKnown RBP19.74■□□□□ 0.75
SLC6A1-202ENST00000425938 MTHFD1LQ6UB35 978 aa19.74■□□□□ 0.75
SLC6A1-202ENST00000425938 RDM1Q8NG50 284 aa19.74■□□□□ 0.75
SLC6A1-202ENST00000425938 OXER1Q8TDS5 423 aa19.74■□□□□ 0.75
SLC6A1-202ENST00000425938 ZBTB10Q96DT7 871 aa19.74■□□□□ 0.75
SLC6A1-202ENST00000425938 IFIH1Q9BYX4 1025 aaKnown RBP19.74■□□□□ 0.75
SLC6A1-202ENST00000425938 CEP131Q9UPN4 1083 aa19.74■□□□□ 0.75
SLC6A1-202ENST00000425938 CDY2AQ9Y6F7 541 aa19.74■□□□□ 0.75
SLC6A1-202ENST00000425938 SMIM35A0A1B0GVV1 85 aa19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 GHRP10912 638 aa19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 ATP4AP20648 1035 aa19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 KLRC1P26715 233 aa19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 MGAT3Q09327 533 aa19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 ADGRE1Q14246 886 aa19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 PPP4R3AQ6IN85 833 aa19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 CCDC83Q8IWF9 413 aa19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 NME8Q8N427 588 aa19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 KIF2CQ99661 725 aa19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 UNC45AQ9H3U1 944 aa19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 SH2B1Q9NRF2 756 aaPredicted RBP19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 IGSF9BQ9UPX0 1349 aa19.73■□□□□ 0.75
SLC6A1-202ENST00000425938 PSMD10O75832 226 aa19.72■□□□□ 0.75
SLC6A1-202ENST00000425938 GJB5O95377 273 aa19.72■□□□□ 0.75
SLC6A1-202ENST00000425938 IGFBP4P22692 258 aa19.72■□□□□ 0.75
SLC6A1-202ENST00000425938 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.72■□□□□ 0.75
SLC6A1-202ENST00000425938 TRMT1LQ7Z2T5 733 aaKnown RBP19.72■□□□□ 0.75
SLC6A1-202ENST00000425938 MIER3Q7Z3K6 550 aa19.72■□□□□ 0.75
SLC6A1-202ENST00000425938 MYOCDQ8IZQ8 938 aa19.72■□□□□ 0.75
SLC6A1-202ENST00000425938 ETNPPLQ8TBG4 499 aa19.72■□□□□ 0.75
SLC6A1-202ENST00000425938 GJA10Q969M2 543 aa19.72■□□□□ 0.75
SLC6A1-202ENST00000425938 LLPHQ9BRT6 129 aaKnown RBP19.72■□□□□ 0.75
SLC6A1-202ENST00000425938 TRPV2Q9Y5S1 764 aa19.72■□□□□ 0.75
SLC6A1-202ENST00000425938 SLC37A4O43826 429 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 MARCH6O60337 910 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 CCNT1O60563 726 aaKnown RBP19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 MMP1P03956 469 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 FOSBP53539 338 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 TMEM62Q0P6H9 643 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 ST3GAL1Q11201 340 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 NR5A1Q13285 461 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 LPIN1Q14693 890 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 RABEP1Q15276 862 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 FBXO47Q5MNV8 452 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 TMCO2Q7Z6W1 182 aaPredicted RBP19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 USP38Q8NB14 1042 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 FAM20AQ96MK3 541 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms