RNA–Protein interactions for RNA: ENST00000424608.1

NUCB1-204, Transcript of nucleobindin 1, humanhuman

APPRIS ALT2 TSL 5

Gene NUCB1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-204ENST00000424608 TAF2Q6P1X5 1199 aa22.62■■□□□ 1.21
NUCB1-204ENST00000424608 TRAF7Q6Q0C0 670 aa22.62■■□□□ 1.21
NUCB1-204ENST00000424608 BBXQ8WY36 941 aaPredicted RBP22.62■■□□□ 1.21
NUCB1-204ENST00000424608 RNPC3Q96LT9 517 aaKnown RBP22.62■■□□□ 1.21
NUCB1-204ENST00000424608 GBF1Q92538 1859 aa22.62■■□□□ 1.21
NUCB1-204ENST00000424608 NEMFO60524 1076 aa22.61■■□□□ 1.21
NUCB1-204ENST00000424608 IGBP1P78318 339 aa22.61■■□□□ 1.21
NUCB1-204ENST00000424608 DEFB128Q7Z7B8 93 aa22.61■■□□□ 1.21
NUCB1-204ENST00000424608 CKAP2LQ8IYA6 745 aa22.61■■□□□ 1.21
NUCB1-204ENST00000424608 K7ELQ4 463 aaPredicted RBP22.6■■□□□ 1.21
NUCB1-204ENST00000424608 FGBP02675 491 aa22.6■■□□□ 1.21
NUCB1-204ENST00000424608 ORC2Q13416 577 aaPredicted RBP22.6■■□□□ 1.21
NUCB1-204ENST00000424608 CALCRLQ16602 461 aa22.6■■□□□ 1.21
NUCB1-204ENST00000424608 RUFY4Q6ZNE9 571 aa22.6■■□□□ 1.21
NUCB1-204ENST00000424608 RPAINQ86UA6 219 aa22.6■■□□□ 1.21
NUCB1-204ENST00000424608 TRAPPC12Q8WVT3 735 aa22.6■■□□□ 1.21
NUCB1-204ENST00000424608 FAM167AQ96KS9 214 aa22.6■■□□□ 1.21
NUCB1-204ENST00000424608 MICAL3Q7RTP6 2002 aa22.6■■□□□ 1.21
NUCB1-204ENST00000424608 ARID2Q68CP9 1835 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 PTPRSQ13332 1948 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 RSPH10B2B2RC85 870 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 H3BQV1 296 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 SOX1O00570 391 aaPredicted RBP22.59■■□□□ 1.21
NUCB1-204ENST00000424608 RPLP2P05387 115 aaKnown RBP22.59■■□□□ 1.21
NUCB1-204ENST00000424608 RSPH10BP0C881 870 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 ATP2B1P20020 1258 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 TRAPPC10P48553 1259 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 GPNMBQ14956 572 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 UGCGQ16739 394 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 ZNF484Q5JVG2 852 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 RASIP1Q5U651 963 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 HERVK_113Q902F9 699 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 SNX21Q969T3 373 aa22.59■■□□□ 1.21
NUCB1-204ENST00000424608 NOL7Q9UMY1 257 aaKnown RBP22.59■■□□□ 1.21
NUCB1-204ENST00000424608 EML1O00423 815 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 ZNF862O60290 1169 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 NBNO60934 754 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 CXCL10P02778 98 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 OATP04181 439 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 MCM7P33993 719 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 SPIRE1Q08AE8 756 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 MTHFD1LQ6UB35 978 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 OTOP2Q7RTS6 562 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 RSPH3Q86UC2 560 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 MTMR9Q96QG7 549 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 MTIF3Q9H2K0 278 aaKnown RBP22.58■■□□□ 1.21
NUCB1-204ENST00000424608 CEP131Q9UPN4 1083 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 PCDHA2Q9Y5H9 948 aa22.58■■□□□ 1.21
NUCB1-204ENST00000424608 ZBTB42B2RXF5 422 aa22.57■■□□□ 1.2
NUCB1-204ENST00000424608 CTSHP09668 335 aa22.57■■□□□ 1.2
NUCB1-204ENST00000424608 PRKCEQ02156 737 aa22.57■■□□□ 1.2
NUCB1-204ENST00000424608 MBTPS1Q14703 1052 aa22.57■■□□□ 1.2
NUCB1-204ENST00000424608 FAM26DQ5JW98 314 aa22.57■■□□□ 1.2
NUCB1-204ENST00000424608 TTC38Q5R3I4 469 aa22.57■■□□□ 1.2
NUCB1-204ENST00000424608 LARP1BQ659C4 914 aaKnown RBP22.57■■□□□ 1.2
NUCB1-204ENST00000424608 DNAJB3Q8WWF6 145 aa22.57■■□□□ 1.2
NUCB1-204ENST00000424608 ZBTB10Q96DT7 871 aa22.57■■□□□ 1.2
NUCB1-204ENST00000424608 INTS4Q96HW7 963 aaKnown RBP22.57■■□□□ 1.2
NUCB1-204ENST00000424608 FTOQ9C0B1 505 aaKnown RBP eCLIP22.57■■□□□ 1.21e-11■■■■■ 54.4
NUCB1-204ENST00000424608 NRBP2Q9NSY0 501 aa22.57■■□□□ 1.2
NUCB1-204ENST00000424608 PCDHA12Q9UN75 941 aa22.57■■□□□ 1.2
NUCB1-204ENST00000424608 ACTN1P12814 892 aa22.56■■□□□ 1.2
NUCB1-204ENST00000424608 KLRC1P26715 233 aa22.56■■□□□ 1.2
NUCB1-204ENST00000424608 MCTP1Q6DN14 999 aa22.56■■□□□ 1.2
NUCB1-204ENST00000424608 TRMT1LQ7Z2T5 733 aaKnown RBP22.56■■□□□ 1.2
NUCB1-204ENST00000424608 TMEM60Q9H2L4 133 aa22.56■■□□□ 1.2
NUCB1-204ENST00000424608 TTC12Q9H892 705 aaPredicted RBP22.56■■□□□ 1.2
NUCB1-204ENST00000424608 SMIM35A0A1B0GVV1 85 aa22.55■■□□□ 1.2
NUCB1-204ENST00000424608 TXKP42681 527 aa22.55■■□□□ 1.2
NUCB1-204ENST00000424608 PSMC5P62195 406 aa22.55■■□□□ 1.2
NUCB1-204ENST00000424608 EPHA7Q15375 998 aa22.55■■□□□ 1.2
NUCB1-204ENST00000424608 ZNF174Q15697 407 aa22.55■■□□□ 1.2
NUCB1-204ENST00000424608 NCAPH2Q6IBW4 605 aa22.55■■□□□ 1.2
NUCB1-204ENST00000424608 BANK1Q8NDB2 785 aa22.55■■□□□ 1.2
NUCB1-204ENST00000424608 LRCH3Q96II8 777 aa22.55■■□□□ 1.2
NUCB1-204ENST00000424608 CXXC1Q9P0U4 656 aaPredicted RBP22.55■■□□□ 1.2
NUCB1-204ENST00000424608 DKC1O60832 514 aaKnown RBP eCLIP22.54■■□□□ 1.21e-7■■■■■ 60.3
NUCB1-204ENST00000424608 C22orf31O95567 290 aa22.54■■□□□ 1.2
NUCB1-204ENST00000424608 P4HBP07237 508 aaKnown RBP22.54■■□□□ 1.2
NUCB1-204ENST00000424608 PDCP20941 246 aa22.54■■□□□ 1.2
NUCB1-204ENST00000424608 QARSP47897 775 aaKnown RBP22.54■■□□□ 1.2
NUCB1-204ENST00000424608 MGAT3Q09327 533 aa22.54■■□□□ 1.2
NUCB1-204ENST00000424608 XKR3Q5GH77 459 aa22.54■■□□□ 1.2
NUCB1-204ENST00000424608 CNKSR3Q6P9H4 555 aa22.54■■□□□ 1.2
NUCB1-204ENST00000424608 FAM49AQ9H0Q0 323 aaPredicted RBP22.54■■□□□ 1.2
NUCB1-204ENST00000424608 LAMA2P24043 3122 aaKnown RBP22.54■■□□□ 1.2
NUCB1-204ENST00000424608 MAGEB2O15479 319 aa22.53■■□□□ 1.2
NUCB1-204ENST00000424608 BAIAP3O94812 1187 aa22.53■■□□□ 1.2
NUCB1-204ENST00000424608 STBD1O95210 358 aa22.53■■□□□ 1.2
NUCB1-204ENST00000424608 CHRNA1P02708 482 aa22.53■■□□□ 1.2
NUCB1-204ENST00000424608 OR52Z1P0C646 297 aa22.53■■□□□ 1.2
NUCB1-204ENST00000424608 TOB1P50616 345 aaPredicted RBP22.53■■□□□ 1.2
NUCB1-204ENST00000424608 MRPS6P82932 125 aaKnown RBP22.53■■□□□ 1.2
NUCB1-204ENST00000424608 SMAD3P84022 425 aaKnown RBP22.53■■□□□ 1.2
NUCB1-204ENST00000424608 GPR153Q6NV75 609 aa22.53■■□□□ 1.2
NUCB1-204ENST00000424608 NME8Q8N427 588 aa22.53■■□□□ 1.2
NUCB1-204ENST00000424608 NIFKQ9BYG3 293 aaKnown RBP22.53■■□□□ 1.2
NUCB1-204ENST00000424608 SEPT9Q9UHD8 586 aaPredicted RBP22.53■■□□□ 1.2
NUCB1-204ENST00000424608 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.52■■□□□ 1.2
NUCB1-204ENST00000424608 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms