RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 CCDC38Q502W7 563 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 FAM133BQ5BKY9 247 aaKnown RBP14.1□□□□□ -0.15
TOP2B-203ENST00000424225 C12orf60Q5U649 245 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 LARP4BQ92615 738 aaKnown RBP14.1□□□□□ -0.15
TOP2B-203ENST00000424225 PYM1Q9BRP8 204 aaKnown RBP14.1□□□□□ -0.15
TOP2B-203ENST00000424225 ATP6V0A4Q9HBG4 840 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 ATP8A1Q9Y2Q0 1164 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 E9PMD0 336 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 MARCKSL1P49006 195 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 RNASELQ05823 741 aaKnown RBP14.1□□□□□ -0.15
TOP2B-203ENST00000424225 FBXO33Q7Z6M2 555 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 RPAINQ86UA6 219 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 KIF2BQ8N4N8 673 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 ALG3Q92685 438 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 COA7Q96BR5 231 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 PIGSQ96S52 555 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 PRMT1Q99873 361 aaKnown RBP14.1□□□□□ -0.15
TOP2B-203ENST00000424225 GPR88Q9GZN0 384 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 KDM4CQ9H3R0 1056 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 NUMBLQ9Y6R0 609 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 SMCO2A6NFE2 343 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 PPFIA2O75334 1257 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 KCNQ4P56696 695 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 DIXDC1Q155Q3 683 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 TNFAIP8L3Q5GJ75 292 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 TTC27Q6P3X3 843 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 CNNM4Q6P4Q7 775 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 BRINP3Q76B58 766 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 BZW1Q7L1Q6 419 aaKnown RBP14.1□□□□□ -0.15
TOP2B-203ENST00000424225 TBC1D1Q86TI0 1168 aaPredicted RBP14.1□□□□□ -0.15
TOP2B-203ENST00000424225 EPS8L3Q8TE67 593 aaKnown RBP14.1□□□□□ -0.15
TOP2B-203ENST00000424225 GRHL1Q9NZI5 618 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 ANP32DO95626 131 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 KRT16P08779 473 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 MYBL1P10243 752 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 MMP13P45452 471 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 MYO1EQ12965 1108 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 DRP2Q13474 957 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 CCDC70Q6NSX1 233 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 TCP11Q8WWU5 503 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 HES6Q96HZ4 224 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 SEMA4AQ9H3S1 761 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 MCM9Q9NXL9 1143 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 ZMYND8Q9ULU4 1186 aaPredicted RBP14.09□□□□□ -0.15
TOP2B-203ENST00000424225 COL4A3BPQ9Y5P4 624 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 ZNFX1Q9P2E3 1918 aaKnown RBP14.09□□□□□ -0.15
TOP2B-203ENST00000424225 NEBLO76041 1014 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 ALADP13716 330 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 RASA1P20936 1047 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 CALML3P27482 149 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 NCALDP61601 193 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 ZNF211Q13398 564 aaPredicted RBP14.09□□□□□ -0.15
TOP2B-203ENST00000424225 C11orf91Q3C1V1 193 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 CACNA2D4Q7Z3S7 1137 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 ZNF483Q8TF39 744 aaPredicted RBP14.09□□□□□ -0.15
TOP2B-203ENST00000424225 CUL5Q93034 780 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 ARHGEF26Q96DR7 871 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 POP1Q99575 1024 aaKnown RBP14.09□□□□□ -0.15
TOP2B-203ENST00000424225 VAT1LQ9HCJ6 419 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 NKX1-2Q9UD57 310 aaPredicted RBP14.09□□□□□ -0.15
TOP2B-203ENST00000424225 NAV1Q8NEY1 1877 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 NHSQ6T4R5 1651 aa14.09□□□□□ -0.15
TOP2B-203ENST00000424225 GOLGA6L7A0A1B0GV03 622 aa14.08□□□□□ -0.15
TOP2B-203ENST00000424225 GH1P01241 217 aa14.08□□□□□ -0.15
TOP2B-203ENST00000424225 CASP4P49662 377 aa14.08□□□□□ -0.15
TOP2B-203ENST00000424225 PSMC6P62333 389 aa14.08□□□□□ -0.15
TOP2B-203ENST00000424225 ZNF568Q3ZCX4 644 aa14.08□□□□□ -0.15
TOP2B-203ENST00000424225 SLC9C1Q4G0N8 1177 aa14.08□□□□□ -0.15
TOP2B-203ENST00000424225 ERICH1Q86X53 443 aa14.08□□□□□ -0.15
TOP2B-203ENST00000424225 ZC3H3Q8IXZ2 948 aaKnown RBP14.08□□□□□ -0.15
TOP2B-203ENST00000424225 TEX11Q8IYF3 940 aa14.08□□□□□ -0.15
TOP2B-203ENST00000424225 TANGO6Q9C0B7 1094 aa14.08□□□□□ -0.15
TOP2B-203ENST00000424225 GM2AP17900 193 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 ALDH5A1P51649 535 aaPredicted RBP14.08□□□□□ -0.16
TOP2B-203ENST00000424225 GALNTL6Q49A17 601 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 FAM114A1Q8IWE2 563 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 GIMAP7Q8NHV1 300 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 SYN2Q92777 582 aaPredicted RBP14.08□□□□□ -0.16
TOP2B-203ENST00000424225 BCS1LQ9Y276 419 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 KLRF2D3W0D1 207 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 UBOX5O94941 541 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 PON1P27169 355 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 JAM2P57087 298 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 SBK1Q52WX2 424 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 AGBL2Q5U5Z8 902 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 DUPD1Q68J44 220 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 CCDC84Q86UT8 332 aaPredicted RBP14.08□□□□□ -0.16
TOP2B-203ENST00000424225 MAB21L3Q8N8X9 362 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 CHMP6Q96FZ7 201 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 GPR101Q96P66 508 aaPredicted RBP14.08□□□□□ -0.16
TOP2B-203ENST00000424225 PSMD1Q99460 953 aa14.08□□□□□ -0.16
TOP2B-203ENST00000424225 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.08□□□□□ -0.16
TOP2B-203ENST00000424225 CLSTN1O94985 981 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 RFC4P35249 363 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 KCNH2Q12809 1159 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 UBE2SQ16763 222 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 SLC30A10Q6XR72 485 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 SV2BQ7L1I2 683 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 CACNA2D3Q8IZS8 1091 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 FBXO25Q8TCJ0 367 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms