RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 LENG9Q96B70 501 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 C8orf76Q96K31 380 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 TBC1D32Q96NH3 1257 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 PCYT2Q99447 389 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 DDX25Q9UHL0 483 aaKnown RBP12.37□□□□□ -0.43
USP49-204ENST00000423567 TUBE1Q9UJT0 475 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 KIF3AQ9Y496 699 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 SLC4A7Q9Y6M7 1214 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 POTEB3A0JP26 581 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 CHMP2AO43633 222 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 CCNT1O60563 726 aaKnown RBP12.36□□□□□ -0.43
USP49-204ENST00000423567 SLC34A2O95436 690 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 INSRRP14616 1297 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 JAK3P52333 1124 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 ST3GAL1Q11201 340 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 HIC1Q14526 733 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 PLCB4Q15147 1175 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 TRIM71Q2Q1W2 868 aaKnown RBP12.36□□□□□ -0.43
USP49-204ENST00000423567 ZNF697Q5TEC3 545 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 SWSAP1Q6NVH7 229 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 PDXDC2PQ6P474 469 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 POTEBQ6S5H4 581 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 DIS3L2Q8IYB7 885 aaKnown RBP12.36□□□□□ -0.43
USP49-204ENST00000423567 DISC1Q9NRI5 854 aa12.36□□□□□ -0.43
USP49-204ENST00000423567 RANBP2P49792 3224 aaKnown RBP12.36□□□□□ -0.43
USP49-204ENST00000423567 IGKV6D-21A0A0A0MT36 114 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 HBP1O60381 514 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 BAIAP3O94812 1187 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 BAG4O95429 457 aaKnown RBP12.35□□□□□ -0.43
USP49-204ENST00000423567 CTSHP09668 335 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 KCNJ6P48051 423 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 NR5A1Q13285 461 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 GNL2Q13823 731 aaKnown RBP12.35□□□□□ -0.43
USP49-204ENST00000423567 RASIP1Q5U651 963 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 FAM109BQ6ICB4 259 aaPredicted RBP12.35□□□□□ -0.43
USP49-204ENST00000423567 PPP4R3AQ6IN85 833 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 CCDC60Q8IWA6 550 aaPredicted RBP12.35□□□□□ -0.43
USP49-204ENST00000423567 DEFB123Q8N688 67 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 RDM1Q8NG50 284 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 ATP8B4Q8TF62 1192 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 WNT8BQ93098 351 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 FAM167AQ96KS9 214 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 FAM20AQ96MK3 541 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 MBOAT7Q96N66 472 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 CXXC1Q9P0U4 656 aaPredicted RBP12.35□□□□□ -0.43
USP49-204ENST00000423567 GABBR1Q9UBS5 961 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 MSRAQ9UJ68 235 aa12.35□□□□□ -0.43
USP49-204ENST00000423567 MBLAC1A4D2B0 266 aaPredicted RBP12.34□□□□□ -0.43
USP49-204ENST00000423567 BTBD18B2RXH4 712 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 M0QZ92 97 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 EDIL3O43854 480 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 NBNO60934 754 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 EFCAB14O75071 495 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 PSMD10O75832 226 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 CXCL10P02778 98 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 ADAM17P78536 824 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 RAB30Q15771 203 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 ZNF484Q5JVG2 852 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 CNKSR3Q6P9H4 555 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 MIER3Q7Z3K6 550 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 EFCAB3Q8N7B9 438 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 BBXQ8WY36 941 aaPredicted RBP12.34□□□□□ -0.43
USP49-204ENST00000423567 BACH2Q9BYV9 841 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 NRBP2Q9NSY0 501 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 CEP131Q9UPN4 1083 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 MAFBQ9Y5Q3 323 aaPredicted RBP12.34□□□□□ -0.43
USP49-204ENST00000423567 DOCK5Q9H7D0 1870 aa12.34□□□□□ -0.43
USP49-204ENST00000423567 COL1A2P08123 1366 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 TMEM265A0A087WTH1 108 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 TBX3O15119 743 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 SLC37A4O43826 429 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 ATP2A2P16615 1042 aaKnown RBP12.33□□□□□ -0.44
USP49-204ENST00000423567 GUCY1B3Q02153 619 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 IKBKEQ14164 716 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 IER5Q5VY09 327 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 RUFY4Q6ZNE9 571 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 TRMT1LQ7Z2T5 733 aaKnown RBP12.33□□□□□ -0.44
USP49-204ENST00000423567 RPAINQ86UA6 219 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 SLFN12Q8IYM2 578 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 ETNPPLQ8TBG4 499 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 SEPT8Q92599 483 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 GJA10Q969M2 543 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 SLC9A7Q96T83 725 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 FAM49AQ9H0Q0 323 aaPredicted RBP12.33□□□□□ -0.44
USP49-204ENST00000423567 UNC45AQ9H3U1 944 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 PCDHA2Q9Y5H9 948 aa12.33□□□□□ -0.44
USP49-204ENST00000423567 ABHD14A-ACY1A0A1B0GW23 586 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 KIF28PB7ZC32 967 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 DNAJB2P25686 324 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 EARS2Q5JPH6 523 aaKnown RBP12.32□□□□□ -0.44
USP49-204ENST00000423567 MARCH8Q5T0T0 291 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 TRAF7Q6Q0C0 670 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 MTHFD1LQ6UB35 978 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 FBXO18Q8NFZ0 1043 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 PHOSPHO2Q8TCD6 241 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 TRAPPC12Q8WVT3 735 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 DNAJB3Q8WWF6 145 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 TNFRSF25Q93038 417 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 TIFAQ96CG3 184 aa12.32□□□□□ -0.44
USP49-204ENST00000423567 VWCEQ96DN2 955 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms