RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 CEP85Q6P2H3 762 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 CCDC81Q6ZN84 652 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 UBN1Q9NPG3 1134 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 USP15Q9Y4E8 981 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 SPATA31E1Q6ZUB1 1445 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 OCM2P0CE71 109 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 OCMP0CE72 109 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 RAP1GDS1P52306 607 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 DCTN4Q9UJW0 460 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 CAPN9O14815 690 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 MAPK13O15264 365 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 KRT16P08779 473 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PDE4BQ07343 736 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PDXDC1Q6P996 788 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PACS1Q6VY07 963 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 AGGF1Q8N302 714 aaeCLIP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 POLR3CQ9BUI4 534 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PAIP1Q9H074 479 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 NMRK1Q9NWW6 199 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 SPATA31D3P0C874 917 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 YY1P25490 414 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 EEF1DP29692 281 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 SPATA31D4Q6ZUB0 917 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 ZNF518AQ6AHZ1 1483 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 G3V3G9 751 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 STK11Q15831 433 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 DCAF8Q5TAQ9 597 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 SPATA4Q8NEY3 305 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 OSCP1Q8WVF1 389 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PCDHA5Q9Y5H7 936 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 CEP152O94986 1710 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PENKP01210 267 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 RESTQ13127 1097 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 BIRC3Q13489 604 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PCDH12Q9NPG4 1184 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PCDHA13Q9Y5I0 950 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 GSTTP1A0A1W2PQM5 241 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PDGFRBP09619 1106 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PFKFB1P16118 471 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 STAT2P52630 851 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 MTMR3Q13615 1198 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 METTL21CQ5VZV1 264 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 SLC15A3Q8IY34 581 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 TRIM47Q96LD4 638 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 AGBL1Q96MI9 1066 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 MKNK1Q9BUB5 465 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 COQ6Q9Y2Z9 468 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 CAMSAP1Q5T5Y3 1602 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 TARSP26639 723 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PCSK7Q16549 785 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 DGCR14Q96DF8 476 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PRMT1Q99873 361 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 MYOM2P54296 1465 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 HEXIM1O94992 359 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 FBLN1P23142 703 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PGM1P36871 562 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PLCD1P51178 756 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PLTPP55058 493 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 FMR1Q06787 632 aaKnown RBP eCLIP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 COBLL1Q53SF7 1204 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 SULT6B1Q6IMI4 303 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 ANKRD36BP1Q96IX9 119 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PDE6AP16499 860 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PPP2R5CQ13362 524 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 POU5F1Q01860 360 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 LACTB2Q53H82 288 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 DHX32Q7L7V1 743 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 ARHGEF25Q86VW2 580 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 BOLA2Q9H3K6 86 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 ARHGAP10A1A4S6 786 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 ESRRBO95718 433 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 LPIN1Q14693 890 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 SLC9C2Q5TAH2 1124 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 C1orf146Q5VVC0 180 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PIGOQ8TEQ8 1089 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 AENQ8WTP8 325 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 STK33Q9BYT3 514 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 KIAA1586Q9HCI6 787 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 MRPL40Q9NQ50 206 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 ATAD3AQ9NVI7 634 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 PRPF6O94906 941 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 MAP3K21Q5TCX8 1036 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 RBM12Q9NTZ6 932 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 CEP72Q9P209 647 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 HARSP12081 509 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 R3HDM1Q15032 1099 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 FAM9CQ8IZT9 166 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 NSMCE3Q96MG7 304 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 EBF2Q9HAK2 575 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 ALG13Q9NP73 1137 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 SCHIP1Q9P0W5 487 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 KCNK3O14649 394 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 TIMM44O43615 452 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 GHRP10912 638 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 ST13P50502 369 aaKnown RBP3.67□□□□□ -1.82
SYNE1-212ENST00000423061 CHST3Q7LGC8 479 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 USP37Q86T82 979 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 TC2NQ8N9U0 490 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 TNIP2Q8NFZ5 429 aa3.67□□□□□ -1.82
SYNE1-212ENST00000423061 XAGE2Q96GT9 111 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms