RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 TDP2O95551 362 aa20.43■□□□□ 0.86
UBXN11-208ENST00000421827 FDPSP14324 419 aaKnown RBP20.43■□□□□ 0.86
UBXN11-208ENST00000421827 MGAT3Q09327 533 aa20.43■□□□□ 0.86
UBXN11-208ENST00000421827 MKRN4PQ13434 485 aaPredicted RBP20.43■□□□□ 0.86
UBXN11-208ENST00000421827 INF2Q27J81 1249 aa20.43■□□□□ 0.86
UBXN11-208ENST00000421827 MOXD1Q6UVY6 613 aa20.43■□□□□ 0.86
UBXN11-208ENST00000421827 TMCO2Q7Z6W1 182 aaPredicted RBP20.43■□□□□ 0.86
UBXN11-208ENST00000421827 APBB2Q92870 758 aa20.43■□□□□ 0.86
UBXN11-208ENST00000421827 FAM49AQ9H0Q0 323 aaPredicted RBP20.43■□□□□ 0.86
UBXN11-208ENST00000421827 GJB4Q9NTQ9 266 aa20.43■□□□□ 0.86
UBXN11-208ENST00000421827 SAMM50Q9Y512 469 aa20.43■□□□□ 0.86
UBXN11-208ENST00000421827 PCDHA2Q9Y5H9 948 aa20.43■□□□□ 0.86
UBXN11-208ENST00000421827 MAFBQ9Y5Q3 323 aaPredicted RBP20.43■□□□□ 0.86
UBXN11-208ENST00000421827 EYSQ5T1H1 3165 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 CCDC194A0A1B0GVG4 234 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 WDR64B1ANS9 1081 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 GAS7O60861 476 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 GJB5O95377 273 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 ATP4AP20648 1035 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 MRPS6P82932 125 aaKnown RBP20.42■□□□□ 0.86
UBXN11-208ENST00000421827 ZNF484Q5JVG2 852 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 LRCH2Q5VUJ6 765 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 MTHFD1LQ6UB35 978 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.42■□□□□ 0.86
UBXN11-208ENST00000421827 CKAP2LQ8IYA6 745 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 NSUN7Q8NE18 718 aaKnown RBP20.42■□□□□ 0.86
UBXN11-208ENST00000421827 MBOAT7Q96N66 472 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 TEKT3Q9BXF9 490 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 IFIH1Q9BYX4 1025 aaKnown RBP20.42■□□□□ 0.86
UBXN11-208ENST00000421827 DISC1Q9NRI5 854 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 CDY2AQ9Y6F7 541 aa20.42■□□□□ 0.86
UBXN11-208ENST00000421827 PTPRSQ13332 1948 aa20.41■□□□□ 0.86
UBXN11-208ENST00000421827 SMIM35A0A1B0GVV1 85 aa20.41■□□□□ 0.86
UBXN11-208ENST00000421827 AMHP03971 560 aa20.41■□□□□ 0.86
UBXN11-208ENST00000421827 GHRP10912 638 aa20.41■□□□□ 0.86
UBXN11-208ENST00000421827 KLRC1P26715 233 aa20.41■□□□□ 0.86
UBXN11-208ENST00000421827 OXER1Q8TDS5 423 aa20.41■□□□□ 0.86
UBXN11-208ENST00000421827 BBXQ8WY36 941 aaPredicted RBP20.41■□□□□ 0.86
UBXN11-208ENST00000421827 GJA10Q969M2 543 aa20.41■□□□□ 0.86
UBXN11-208ENST00000421827 RAD9AQ99638 391 aa20.41■□□□□ 0.86
UBXN11-208ENST00000421827 GABBR1Q9UBS5 961 aa20.41■□□□□ 0.86
UBXN11-208ENST00000421827 COL1A2P08123 1366 aa20.41■□□□□ 0.86
UBXN11-208ENST00000421827 A0A0C4DFX4 3053 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 CHMP2AO43633 222 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 PSMD10O75832 226 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 ARHGEF15O94989 841 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 SFNP31947 248 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 TAP1Q03518 808 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 LPIN1Q14693 890 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 LETM2Q2VYF4 491 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 FBXO47Q5MNV8 452 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 IER5Q5VY09 327 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 FAM117BQ6P1L5 589 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 MYOCDQ8IZQ8 938 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 UNC45AQ9H3U1 944 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 DDX25Q9UHL0 483 aaKnown RBP20.4■□□□□ 0.86
UBXN11-208ENST00000421827 LIMCH1Q9UPQ0 1083 aa20.4■□□□□ 0.86
UBXN11-208ENST00000421827 MICAL3Q7RTP6 2002 aa20.39■□□□□ 0.86
UBXN11-208ENST00000421827 IGSF9BQ9UPX0 1349 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 LCHNA4D1U4 455 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 ZBTB42B2RXF5 422 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 M0QZ92 97 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 JAK2O60674 1132 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 JAK3P52333 1124 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 ADGRE1Q14246 886 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 PIK3AP1Q6ZUJ8 805 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 NEK8Q86SG6 692 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 NME8Q8N427 588 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 ETNPPLQ8TBG4 499 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 FAM167AQ96KS9 214 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 BRMS1Q9HCU9 246 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 TRPV2Q9Y5S1 764 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 PRUNE2Q8WUY3 3088 aa20.39■□□□□ 0.85
UBXN11-208ENST00000421827 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.38■□□□□ 0.85
UBXN11-208ENST00000421827 IGFBP4P22692 258 aa20.38■□□□□ 0.85
UBXN11-208ENST00000421827 TMEM62Q0P6H9 643 aa20.38■□□□□ 0.85
UBXN11-208ENST00000421827 ST3GAL1Q11201 340 aa20.38■□□□□ 0.85
UBXN11-208ENST00000421827 TSHZ1Q6ZSZ6 1077 aa20.38■□□□□ 0.85
UBXN11-208ENST00000421827 TRMT1LQ7Z2T5 733 aaKnown RBP20.38■□□□□ 0.85
UBXN11-208ENST00000421827 RDM1Q8NG50 284 aa20.38■□□□□ 0.85
UBXN11-208ENST00000421827 KIF2CQ99661 725 aa20.38■□□□□ 0.85
UBXN11-208ENST00000421827 CERS4Q9HA82 394 aa20.38■□□□□ 0.85
UBXN11-208ENST00000421827 SQORQ9Y6N5 450 aa20.38■□□□□ 0.85
UBXN11-208ENST00000421827 MYH9P35579 1960 aaKnown RBP20.37■□□□□ 0.85
UBXN11-208ENST00000421827 SLC37A4O43826 429 aa20.37■□□□□ 0.85
UBXN11-208ENST00000421827 GCFC2P16383 781 aaKnown RBP20.37■□□□□ 0.85
UBXN11-208ENST00000421827 KRT2P35908 639 aa20.37■□□□□ 0.85
UBXN11-208ENST00000421827 PPP4R3AQ6IN85 833 aa20.37■□□□□ 0.85
UBXN11-208ENST00000421827 B3GNT9Q6UX72 402 aa20.37■□□□□ 0.85
UBXN11-208ENST00000421827 MIER3Q7Z3K6 550 aa20.37■□□□□ 0.85
UBXN11-208ENST00000421827 KIAA0319LQ8IZA0 1049 aa20.37■□□□□ 0.85
UBXN11-208ENST00000421827 TOP1MTQ969P6 601 aa20.37■□□□□ 0.85
UBXN11-208ENST00000421827 NAP1L4Q99733 375 aaKnown RBP20.37■□□□□ 0.85
UBXN11-208ENST00000421827 CELF4Q9BZC1 486 aaKnown RBP20.37■□□□□ 0.85
UBXN11-208ENST00000421827 NRBP2Q9NSY0 501 aa20.37■□□□□ 0.85
UBXN11-208ENST00000421827 CEP131Q9UPN4 1083 aa20.37■□□□□ 0.85
UBXN11-208ENST00000421827 INSL6Q9Y581 213 aa20.37■□□□□ 0.85
UBXN11-208ENST00000421827 SIP14410 1827 aa20.37■□□□□ 0.85
UBXN11-208ENST00000421827 KDM3AQ9Y4C1 1321 aa20.36■□□□□ 0.85
UBXN11-208ENST00000421827 ZNF862O60290 1169 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms