RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 C16orf70Q9BSU1 422 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 MCOLN1Q9GZU1 580 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 SMARCAD1Q9H4L7 1026 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 AZI2Q9H6S1 392 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 SPC25Q9HBM1 224 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 XPNPEP3Q9NQH7 507 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 DACT1Q9NYF0 836 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 USP25Q9UHP3 1055 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 MYH9P35579 1960 aaKnown RBP13.96□□□□□ -0.17
TMEM53-206ENST00000420706 ACTN4O43707 911 aaKnown RBP13.96□□□□□ -0.17
TMEM53-206ENST00000420706 CCL5P13501 91 aa13.96□□□□□ -0.17
TMEM53-206ENST00000420706 SKOR2Q2VWA4 1001 aaPredicted RBP13.96□□□□□ -0.17
TMEM53-206ENST00000420706 GNASQ5JWF2 1037 aa13.96□□□□□ -0.17
TMEM53-206ENST00000420706 KRBA2Q6ZNG9 492 aa13.96□□□□□ -0.17
TMEM53-206ENST00000420706 PIGOQ8TEQ8 1089 aa13.96□□□□□ -0.17
TMEM53-206ENST00000420706 RAD54LQ92698 747 aa13.96□□□□□ -0.17
TMEM53-206ENST00000420706 GLG1Q92896 1179 aa13.96□□□□□ -0.17
TMEM53-206ENST00000420706 ARMC5Q96C12 935 aa13.96□□□□□ -0.17
TMEM53-206ENST00000420706 PAK6Q9NQU5 681 aaPredicted RBP13.96□□□□□ -0.17
TMEM53-206ENST00000420706 STK17AQ9UEE5 414 aa13.96□□□□□ -0.17
TMEM53-206ENST00000420706 DNM3Q9UQ16 869 aa13.96□□□□□ -0.17
TMEM53-206ENST00000420706 TRAK2O60296 914 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 EYA4O95677 639 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 MYCP01106 439 aaPredicted RBP13.95□□□□□ -0.18
TMEM53-206ENST00000420706 MYL3P08590 195 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 SLFN14P0C7P3 912 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 CST5P28325 142 aaPredicted RBP13.95□□□□□ -0.18
TMEM53-206ENST00000420706 YWHABP31946 246 aaKnown RBP13.95□□□□□ -0.18
TMEM53-206ENST00000420706 SLC26A2P50443 739 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 MCM6Q14566 821 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 PLCB4Q15147 1175 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 KLHL40Q2TBA0 621 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 XKR3Q5GH77 459 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 CCSAPQ6IQ19 270 aaPredicted RBP13.95□□□□□ -0.18
TMEM53-206ENST00000420706 ANO5Q75V66 913 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 TRIM50Q86XT4 487 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 ELOA2Q8IYF1 753 aaPredicted RBP13.95□□□□□ -0.18
TMEM53-206ENST00000420706 CNNM3Q8NE01 707 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 LARP4BQ92615 738 aaKnown RBP13.95□□□□□ -0.18
TMEM53-206ENST00000420706 KAT2BQ92831 832 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 ZNF333Q96JL9 665 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 RNF208Q9H0X6 261 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 CUEDC2Q9H467 287 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 NRBP2Q9NSY0 501 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 ANKEF1Q9NU02 776 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 ERAP1Q9NZ08 941 aa13.95□□□□□ -0.18
TMEM53-206ENST00000420706 H3BRB1 525 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 ZEB2O60315 1214 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 KPNA6O60684 536 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 KINO60870 393 aaKnown RBP13.94□□□□□ -0.18
TMEM53-206ENST00000420706 OATP04181 439 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 PLA2G4BP0C869 781 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 ZNF286BP0CG31 522 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 PURAQ00577 322 aaKnown RBP13.94□□□□□ -0.18
TMEM53-206ENST00000420706 PRKCEQ02156 737 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 LRRC41Q15345 812 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 SV2BQ7L1I2 683 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 OTUD6AQ7L8S5 288 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 TRMT1LQ7Z2T5 733 aaKnown RBP13.94□□□□□ -0.18
TMEM53-206ENST00000420706 SH3RF1Q7Z6J0 888 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 CKAP2LQ8IYA6 745 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 CEP57L1Q8IYX8 460 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 SYT2Q8N9I0 419 aaPredicted RBP13.94□□□□□ -0.18
TMEM53-206ENST00000420706 BBXQ8WY36 941 aaPredicted RBP13.94□□□□□ -0.18
TMEM53-206ENST00000420706 PAGE5Q96GU1 130 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 MTRQ99707 1265 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 NIFKQ9BYG3 293 aaKnown RBP13.94□□□□□ -0.18
TMEM53-206ENST00000420706 RNPEPQ9H4A4 650 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 TUT1Q9H6E5 874 aaKnown RBP13.94□□□□□ -0.18
TMEM53-206ENST00000420706 MAGEF1Q9HAY2 307 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 KBTBD4Q9NVX7 518 aa13.94□□□□□ -0.18
TMEM53-206ENST00000420706 DBR1Q9UK59 544 aaKnown RBP13.94□□□□□ -0.18
TMEM53-206ENST00000420706 TMEM150BA6NC51 233 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 HAS3O00219 553 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 HBP1O60381 514 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 MARK3P27448 753 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 AFMP43652 599 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 SLC12A3P55017 1021 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 MDM2Q00987 491 aaPredicted RBP13.93□□□□□ -0.18
TMEM53-206ENST00000420706 DHX8Q14562 1220 aaKnown RBP13.93□□□□□ -0.18
TMEM53-206ENST00000420706 KCNA10Q16322 511 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 KANK3Q6NY19 840 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 RNF180Q86T96 592 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 PCSK9Q8NBP7 692 aaKnown RBP13.93□□□□□ -0.18
TMEM53-206ENST00000420706 ATP8B4Q8TF62 1192 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 STAMQ92783 540 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 FAM167AQ96KS9 214 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 DEFB118Q96PH6 123 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 BHMT2Q9H2M3 363 aa13.93□□□□□ -0.18
TMEM53-206ENST00000420706 ZNF215Q9UL58 517 aaPredicted RBP13.93□□□□□ -0.18
TMEM53-206ENST00000420706 CAPN15O75808 1086 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 F2P00734 622 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 SSBP05455 408 aaKnown RBP eCLIP13.92□□□□□ -0.18
TMEM53-206ENST00000420706 ASGR1P07306 291 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 RARRES1P49788 294 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 PSEN2P49810 448 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 NPEPPSP55786 919 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 TARBP2Q15633 366 aaKnown RBP13.92□□□□□ -0.18
TMEM53-206ENST00000420706 CAMK4Q16566 473 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 XKR9Q5GH70 373 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms