RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 PTPROQ16827 1216 aa17.17■□□□□ 0.34
RARA-205ENST00000420042 EPC2Q52LR7 807 aa17.17■□□□□ 0.34
RARA-205ENST00000420042 PDXDC2PQ6P474 469 aa17.17■□□□□ 0.34
RARA-205ENST00000420042 MTHFD1LQ6UB35 978 aa17.17■□□□□ 0.34
RARA-205ENST00000420042 ABHD15Q6UXT9 468 aa17.17■□□□□ 0.34
RARA-205ENST00000420042 NME8Q8N427 588 aa17.17■□□□□ 0.34
RARA-205ENST00000420042 CRYGNQ8WXF5 182 aa17.17■□□□□ 0.34
RARA-205ENST00000420042 UIMC1Q96RL1 719 aa17.17■□□□□ 0.34
RARA-205ENST00000420042 TRPV2Q9Y5S1 764 aa17.17■□□□□ 0.34
RARA-205ENST00000420042 CYP46A1Q9Y6A2 500 aa17.17■□□□□ 0.34
RARA-205ENST00000420042 PRRC2BQ5JSZ5 2229 aaKnown RBP17.17■□□□□ 0.34
RARA-205ENST00000420042 SMIM35A0A1B0GVV1 85 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 HBP1O60381 514 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 CD52P31358 61 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 EVCP57679 992 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 PRR16Q569H4 304 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 SWSAP1Q6NVH7 229 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 TMEM192Q8IY95 271 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 CKAP2LQ8IYA6 745 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 TRIM22Q8IYM9 498 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 FIBCD1Q8N539 461 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 ATP8B4Q8TF62 1192 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 NCOA5Q9HCD5 579 aaKnown RBP17.16■□□□□ 0.34
RARA-205ENST00000420042 ZSWIM6Q9HCJ5 1215 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 VPS54Q9P1Q0 977 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 SQORQ9Y6N5 450 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 MICAL3Q7RTP6 2002 aa17.16■□□□□ 0.34
RARA-205ENST00000420042 KAT6AQ92794 2004 aa17.15■□□□□ 0.34
RARA-205ENST00000420042 ADAMTS3O15072 1205 aa17.15■□□□□ 0.34
RARA-205ENST00000420042 DHX15O43143 795 aaKnown RBP17.15■□□□□ 0.34
RARA-205ENST00000420042 KLRC1P26715 233 aa17.15■□□□□ 0.34
RARA-205ENST00000420042 NLRP5P59047 1200 aa17.15■□□□□ 0.34
RARA-205ENST00000420042 KRT76Q01546 638 aa17.15■□□□□ 0.34
RARA-205ENST00000420042 SSRP1Q08945 709 aaKnown RBP17.15■□□□□ 0.34
RARA-205ENST00000420042 GPM6BQ13491 265 aa17.15■□□□□ 0.34
RARA-205ENST00000420042 ZNF746Q6NUN9 644 aaPredicted RBP17.15■□□□□ 0.34
RARA-205ENST00000420042 CCDC60Q8IWA6 550 aaPredicted RBP17.15■□□□□ 0.34
RARA-205ENST00000420042 RASGRP4Q8TDF6 673 aa17.15■□□□□ 0.34
RARA-205ENST00000420042 MRPL38Q96DV4 380 aaKnown RBP17.15■□□□□ 0.34
RARA-205ENST00000420042 FTHL17Q9BXU8 183 aa17.15■□□□□ 0.34
RARA-205ENST00000420042 CELF4Q9BZC1 486 aaKnown RBP17.15■□□□□ 0.34
RARA-205ENST00000420042 AGO3Q9H9G7 860 aaKnown RBP17.15■□□□□ 0.34
RARA-205ENST00000420042 SH3GLB2Q9NR46 395 aa17.15■□□□□ 0.34
RARA-205ENST00000420042 COL4A4P53420 1690 aaPredicted RBP17.14■□□□□ 0.33
RARA-205ENST00000420042 PRUNE2Q8WUY3 3088 aa17.14■□□□□ 0.33
RARA-205ENST00000420042 H3BNC9 293 aa17.14■□□□□ 0.33
RARA-205ENST00000420042 CPLX1O14810 134 aa17.14■□□□□ 0.33
RARA-205ENST00000420042 PSAPP07602 524 aa17.14■□□□□ 0.33
RARA-205ENST00000420042 CIITAP33076 1130 aa17.14■□□□□ 0.33
RARA-205ENST00000420042 PAK2Q13177 524 aa17.14■□□□□ 0.33
RARA-205ENST00000420042 TOB2Q14106 344 aaPredicted RBP17.14■□□□□ 0.33
RARA-205ENST00000420042 ZNF484Q5JVG2 852 aa17.14■□□□□ 0.33
RARA-205ENST00000420042 SMAP1Q8IYB5 467 aaPredicted RBP17.14■□□□□ 0.33
RARA-205ENST00000420042 GINS2Q9Y248 185 aa17.14■□□□□ 0.33
RARA-205ENST00000420042 RWDD3Q9Y3V2 267 aa17.14■□□□□ 0.33
RARA-205ENST00000420042 SAMM50Q9Y512 469 aa17.14■□□□□ 0.33
RARA-205ENST00000420042 COL1A2P08123 1366 aa17.14■□□□□ 0.33
RARA-205ENST00000420042 VCANP13611 3396 aa17.14■□□□□ 0.33
RARA-205ENST00000420042 CTNNB1P35222 781 aa17.13■□□□□ 0.33
RARA-205ENST00000420042 CPLX2Q6PUV4 134 aaKnown RBP17.13■□□□□ 0.33
RARA-205ENST00000420042 BBXQ8WY36 941 aaPredicted RBP17.13■□□□□ 0.33
RARA-205ENST00000420042 ZNF274Q96GC6 653 aaPredicted RBP17.13■□□□□ 0.33
RARA-205ENST00000420042 NECAB3Q96P71 396 aaPredicted RBP17.13■□□□□ 0.33
RARA-205ENST00000420042 TM6SF1Q9BZW5 370 aa17.13■□□□□ 0.33
RARA-205ENST00000420042 PADI3Q9ULW8 664 aa17.13■□□□□ 0.33
RARA-205ENST00000420042 PCDHA10Q9Y5I2 948 aa17.13■□□□□ 0.33
RARA-205ENST00000420042 ADGRA3Q8IWK6 1321 aa17.13■□□□□ 0.33
RARA-205ENST00000420042 IGSF9BQ9UPX0 1349 aa17.13■□□□□ 0.33
RARA-205ENST00000420042 USP11P51784 963 aa17.12■□□□□ 0.33
RARA-205ENST00000420042 BTG3Q14201 252 aaPredicted RBP17.12■□□□□ 0.33
RARA-205ENST00000420042 TIGD5Q53EQ6 642 aa17.12■□□□□ 0.33
RARA-205ENST00000420042 TRMT1LQ7Z2T5 733 aaKnown RBP17.12■□□□□ 0.33
RARA-205ENST00000420042 LARP6Q9BRS8 491 aaKnown RBP17.12■□□□□ 0.33
RARA-205ENST00000420042 C22orf23Q9BZE7 217 aa17.12■□□□□ 0.33
RARA-205ENST00000420042 UPF3BQ9BZI7 483 aaKnown RBP17.12■□□□□ 0.33
RARA-205ENST00000420042 PDRG1Q9NUG6 133 aa17.12■□□□□ 0.33
RARA-205ENST00000420042 GABBR1Q9UBS5 961 aa17.12■□□□□ 0.33
RARA-205ENST00000420042 MAFBQ9Y5Q3 323 aaPredicted RBP17.12■□□□□ 0.33
RARA-205ENST00000420042 KDM3AQ9Y4C1 1321 aa17.12■□□□□ 0.33
RARA-205ENST00000420042 SIP14410 1827 aa17.12■□□□□ 0.33
RARA-205ENST00000420042 CHD7Q9P2D1 2997 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 COL4A6Q14031 1691 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 WDR64B1ANS9 1081 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 DGKIO75912 1065 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 DEXIO95424 95 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 RB1P06400 928 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 STAG3L1P0CL83 205 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 ATP4AP20648 1035 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 BMPR1AP36894 532 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 NFX1Q12986 1120 aaKnown RBP17.11■□□□□ 0.33
RARA-205ENST00000420042 STK3Q13188 491 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 ODR4Q5SWX8 454 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 RTN4RL1Q86UN2 441 aaPredicted RBP17.11■□□□□ 0.33
RARA-205ENST00000420042 NPAS4Q8IUM7 802 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 KIAA0319LQ8IZA0 1049 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 BANK1Q8NDB2 785 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 C11orf84Q9BUA3 381 aaPredicted RBP17.11■□□□□ 0.33
RARA-205ENST00000420042 UBE2ZQ9H832 354 aaPredicted RBP17.11■□□□□ 0.33
RARA-205ENST00000420042 PCDHA4Q9UN74 947 aa17.11■□□□□ 0.33
RARA-205ENST00000420042 CEP131Q9UPN4 1083 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms