RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ADAMTS5Q9UNA0 930 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 STX8Q9UNK0 236 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 NEDD4P46934 1319 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 SLC15A5A6NIM6 579 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 VWA5AO00534 786 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 ZNF213O14771 459 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 FBXO24O75426 580 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 GJB1P08034 283 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 ZKSCAN1P17029 563 aaPredicted RBP8.14□□□□□ -1.11
HMGN1-205ENST00000419378 ITPKAP23677 461 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 CHMLP26374 656 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 GJA8P48165 433 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 GRB14Q14449 540 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 PLS1Q14651 629 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 SLFN13Q68D06 897 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 MFSD6Q6ZSS7 791 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 RASGRP2Q7LDG7 609 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 SKAP1Q86WV1 359 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 GALNT6Q8NCL4 622 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 REPS2Q8NFH8 660 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 EDARADDQ8WWZ3 215 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 ZNF775Q96BV0 537 aaPredicted RBP8.14□□□□□ -1.11
HMGN1-205ENST00000419378 MUC3BQ9H195 1237 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 RNF41Q9H4P4 317 aaPredicted RBP8.14□□□□□ -1.11
HMGN1-205ENST00000419378 MROH8Q9H579 483 aa8.14□□□□□ -1.11
HMGN1-205ENST00000419378 ZNF214Q9UL59 606 aaPredicted RBP8.14□□□□□ -1.11
HMGN1-205ENST00000419378 OIP5O43482 229 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 ALBP02768 609 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 BMP3P12645 472 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 ST13P50502 369 aaKnown RBP8.13□□□□□ -1.11
HMGN1-205ENST00000419378 CCL14Q16627 93 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 MAP3K21Q5TCX8 1036 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 GDF6Q6KF10 455 aaPredicted RBP8.13□□□□□ -1.11
HMGN1-205ENST00000419378 C20orf204Q6ZNR8 217 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 RIOX2Q8IUF8 465 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 U2AF1L4Q8WU68 220 aaKnown RBP8.13□□□□□ -1.11
HMGN1-205ENST00000419378 RUFY2Q8WXA3 655 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 BSNDQ8WZ55 320 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 DEFB118Q96PH6 123 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.13□□□□□ -1.114e-10■■■■□ 24
HMGN1-205ENST00000419378 ZNF576Q9H609 170 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 JPH1Q9HDC5 661 aaPredicted RBP8.13□□□□□ -1.11
HMGN1-205ENST00000419378 PAK6Q9NQU5 681 aaPredicted RBP8.13□□□□□ -1.11
HMGN1-205ENST00000419378 TCP11L1Q9NUJ3 509 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 CTNNA3Q9UI47 895 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 FEM1BQ9UK73 627 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 PPM1HQ9ULR3 514 aa8.13□□□□□ -1.11
HMGN1-205ENST00000419378 SHISA8B8ZZ34 492 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 SGSM2O43147 1006 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 STRNO43815 780 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 SLC25A27O95847 323 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 HOXC6P09630 235 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 TOP1P11387 765 aaKnown RBP8.12□□□□□ -1.11
HMGN1-205ENST00000419378 MCCP23508 829 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 ADORA2AP29274 412 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 COPB2P35606 906 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 STAT3P40763 770 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 SLC1A4P43007 532 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 NT5C2P49902 561 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 IMMTQ16891 758 aaKnown RBP8.12□□□□□ -1.11
HMGN1-205ENST00000419378 SNRNP48Q6IEG0 339 aaKnown RBP8.12□□□□□ -1.11
HMGN1-205ENST00000419378 RCSD1Q6JBY9 416 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 KCTD1Q719H9 257 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 NT5DC4Q86YG4 428 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 ABRAQ8N0Z2 381 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 PRPF38AQ8NAV1 312 aaKnown RBP8.12□□□□□ -1.11
HMGN1-205ENST00000419378 NPLOC4Q8TAT6 608 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 TTC9Q92623 222 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 ESR2Q92731 530 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 CHMP4CQ96CF2 233 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 TMEM47Q9BQJ4 181 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 TEX13BQ9BXU2 312 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 ADAM19Q9H013 955 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 SLC38A10Q9HBR0 1119 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 SH2B1Q9NRF2 756 aaPredicted RBP8.12□□□□□ -1.11
HMGN1-205ENST00000419378 FLRT1Q9NZU1 646 aa8.12□□□□□ -1.11
HMGN1-205ENST00000419378 ISY1Q9ULR0 285 aaKnown RBP8.12□□□□□ -1.11
HMGN1-205ENST00000419378 RPTORQ8N122 1335 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 B4E1Z4 1266 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 TMEM232C9JQI7 657 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 COBLO75128 1261 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 ZBED4O75132 1171 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 SGPL1O95470 568 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 FCER1AP12319 257 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 ERCC5P28715 1186 aaPredicted RBP8.11□□□□□ -1.11
HMGN1-205ENST00000419378 STAT2P52630 851 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 PTH1RQ03431 593 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 CACNB2Q08289 660 aaPredicted RBP8.11□□□□□ -1.11
HMGN1-205ENST00000419378 IKQ13123 557 aaPredicted RBP8.11□□□□□ -1.11
HMGN1-205ENST00000419378 CCDC96Q2M329 555 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 BMP2KLQ5H9B9 411 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 LYPD4Q6UWN0 246 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 C8orf86Q6ZUL3 223 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 CHSY3Q70JA7 882 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 VN1R5Q7Z5H4 357 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 DPP9Q86TI2 863 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 FAM160B2Q86V87 743 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 DCAF4Q8WV16 495 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 CCDC136Q96JN2 1154 aa8.11□□□□□ -1.11
HMGN1-205ENST00000419378 BTBD6Q96KE9 485 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms