RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 MRPS6P82932 125 aaKnown RBP18.64■□□□□ 0.57
LINC00404-201ENST00000418660 TAP1Q03518 808 aa18.64■□□□□ 0.57
LINC00404-201ENST00000418660 ADGRE1Q14246 886 aa18.64■□□□□ 0.57
LINC00404-201ENST00000418660 ZNF484Q5JVG2 852 aa18.64■□□□□ 0.57
LINC00404-201ENST00000418660 IER5Q5VY09 327 aa18.64■□□□□ 0.57
LINC00404-201ENST00000418660 MTHFD1LQ6UB35 978 aa18.64■□□□□ 0.57
LINC00404-201ENST00000418660 MOXD1Q6UVY6 613 aa18.64■□□□□ 0.57
LINC00404-201ENST00000418660 GTF3C6Q969F1 213 aa18.64■□□□□ 0.57
LINC00404-201ENST00000418660 ZBTB10Q96DT7 871 aa18.64■□□□□ 0.57
LINC00404-201ENST00000418660 MBOAT7Q96N66 472 aa18.64■□□□□ 0.57
LINC00404-201ENST00000418660 RAD9AQ99638 391 aa18.64■□□□□ 0.57
LINC00404-201ENST00000418660 IFIH1Q9BYX4 1025 aaKnown RBP18.64■□□□□ 0.57
LINC00404-201ENST00000418660 FAM49AQ9H0Q0 323 aaPredicted RBP18.64■□□□□ 0.57
LINC00404-201ENST00000418660 CDY2AQ9Y6F7 541 aa18.64■□□□□ 0.57
LINC00404-201ENST00000418660 PTPRSQ13332 1948 aa18.64■□□□□ 0.57
LINC00404-201ENST00000418660 SMIM35A0A1B0GVV1 85 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 WDR64B1ANS9 1081 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 GAS7O60861 476 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 DTNBO60941 627 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 LARGE1O95461 756 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 TDP2O95551 362 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 GHRP10912 638 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 ATP4AP20648 1035 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 LPIN1Q14693 890 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 CKAP2LQ8IYA6 745 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 NME8Q8N427 588 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 BBXQ8WY36 941 aaPredicted RBP18.63■□□□□ 0.57
LINC00404-201ENST00000418660 GABBR1Q9UBS5 961 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 SAMM50Q9Y512 469 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 COL6A3P12111 3177 aa18.63■□□□□ 0.57
LINC00404-201ENST00000418660 CCDC194A0A1B0GVG4 234 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 ARHGEF15O94989 841 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 FDPSP14324 419 aaKnown RBP18.62■□□□□ 0.57
LINC00404-201ENST00000418660 IGFBP4P22692 258 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 KLRC1P26715 233 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 INF2Q27J81 1249 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 C8orf34Q49A92 452 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 FBXO47Q5MNV8 452 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 LRCH2Q5VUJ6 765 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 FAM117BQ6P1L5 589 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.62■□□□□ 0.57
LINC00404-201ENST00000418660 MYOCDQ8IZQ8 938 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 TEKT3Q9BXF9 490 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 DISC1Q9NRI5 854 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 GJB4Q9NTQ9 266 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 SQORQ9Y6N5 450 aa18.62■□□□□ 0.57
LINC00404-201ENST00000418660 IGSF9BQ9UPX0 1349 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.61■□□□□ 0.57
LINC00404-201ENST00000418660 LCHNA4D1U4 455 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 M0QZ92 97 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 PSMD10O75832 226 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 SFNP31947 248 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 JAK3P52333 1124 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 TSHZ1Q6ZSZ6 1077 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 USP38Q8NB14 1042 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 NSUN7Q8NE18 718 aaKnown RBP18.61■□□□□ 0.57
LINC00404-201ENST00000418660 TOP1MTQ969P6 601 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 UNC45AQ9H3U1 944 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 CERS4Q9HA82 394 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 DDX25Q9UHL0 483 aaKnown RBP18.61■□□□□ 0.57
LINC00404-201ENST00000418660 INSL6Q9Y581 213 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 TRPV2Q9Y5S1 764 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 CDH23Q9H251 3354 aa18.61■□□□□ 0.57
LINC00404-201ENST00000418660 ZBTB42B2RXF5 422 aa18.6■□□□□ 0.57
LINC00404-201ENST00000418660 LETM2Q2VYF4 491 aa18.6■□□□□ 0.57
LINC00404-201ENST00000418660 RDM1Q8NG50 284 aa18.6■□□□□ 0.57
LINC00404-201ENST00000418660 ETNPPLQ8TBG4 499 aa18.6■□□□□ 0.57
LINC00404-201ENST00000418660 ARNTL2Q8WYA1 636 aa18.6■□□□□ 0.57
LINC00404-201ENST00000418660 FAM167AQ96KS9 214 aa18.6■□□□□ 0.57
LINC00404-201ENST00000418660 CELF4Q9BZC1 486 aaKnown RBP18.6■□□□□ 0.57
LINC00404-201ENST00000418660 CEP131Q9UPN4 1083 aa18.6■□□□□ 0.57
LINC00404-201ENST00000418660 KDM3AQ9Y4C1 1321 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 RFXAPO00287 272 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 CHMP2AO43633 222 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 POU3F3P20264 500 aaPredicted RBP18.59■□□□□ 0.57
LINC00404-201ENST00000418660 HTRA4P83105 476 aaPredicted RBP18.59■□□□□ 0.57
LINC00404-201ENST00000418660 TMEM62Q0P6H9 643 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 PPP4R3AQ6IN85 833 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 B3GNT9Q6UX72 402 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 NEK8Q86SG6 692 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 KIAA0319LQ8IZA0 1049 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 OXER1Q8TDS5 423 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 GJA10Q969M2 543 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 AGO3Q9H9G7 860 aaKnown RBP18.59■□□□□ 0.57
LINC00404-201ENST00000418660 NRBP2Q9NSY0 501 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 LIMCH1Q9UPQ0 1083 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 MICAL3Q7RTP6 2002 aa18.59■□□□□ 0.57
LINC00404-201ENST00000418660 SIP14410 1827 aa18.58■□□□□ 0.57
LINC00404-201ENST00000418660 CHD9Q3L8U1 2897 aa18.58■□□□□ 0.57
LINC00404-201ENST00000418660 LINC01553A4QN01 128 aa18.58■□□□□ 0.56
LINC00404-201ENST00000418660 EPOPA6NHQ4 379 aa18.58■□□□□ 0.56
LINC00404-201ENST00000418660 ZNF862O60290 1169 aa18.58■□□□□ 0.56
LINC00404-201ENST00000418660 C22orf31O95567 290 aa18.58■□□□□ 0.56
LINC00404-201ENST00000418660 GCFC2P16383 781 aaKnown RBP18.58■□□□□ 0.56
LINC00404-201ENST00000418660 KRT2P35908 639 aa18.58■□□□□ 0.56
LINC00404-201ENST00000418660 PIK3AP1Q6ZUJ8 805 aa18.58■□□□□ 0.56
LINC00404-201ENST00000418660 TRMT1LQ7Z2T5 733 aaKnown RBP18.58■□□□□ 0.56
LINC00404-201ENST00000418660 MIER3Q7Z3K6 550 aa18.58■□□□□ 0.56
LINC00404-201ENST00000418660 SP7Q8TDD2 431 aaPredicted RBP18.58■□□□□ 0.56
LINC00404-201ENST00000418660 NAP1L4Q99733 375 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms