RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 CHST13Q8NET6 341 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 PIGOQ8TEQ8 1089 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 ZC3H15Q8WU90 426 aaKnown RBP10□□□□□ -0.81
LINCMD1-201ENST00000418518 TMEM174Q8WUU8 243 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 CPLX3Q8WVH0 158 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 TIPINQ9BVW5 301 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 ZSWIM4Q9H7M6 989 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 ACAD9Q9H845 621 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 MRPL44Q9H9J2 332 aaKnown RBP10□□□□□ -0.81
LINCMD1-201ENST00000418518 PARVGQ9HBI0 331 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 HOMER2Q9NSB8 354 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 HOXC10Q9NYD6 342 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 RNF181Q9P0P0 153 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 MYH10P35580 1976 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 A0A0G2JLL6 359 aaPredicted RBP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 WDR64B1ANS9 1081 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 CETN3O15182 167 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 CALUO43852 315 aaPredicted RBP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 MYBP10242 640 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 YBX3P16989 372 aaKnown RBP eCLIP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 TRIM21P19474 475 aaKnown RBP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 EIF2AK2P19525 551 aaKnown RBP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 QARSP47897 775 aaKnown RBP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 RAD51AP2Q09MP3 1159 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 ALCAMQ13740 583 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 ZNF746Q6NUN9 644 aaPredicted RBP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 NSMFQ6X4W1 530 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 SYT10Q6XYQ8 523 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 USP50Q70EL3 339 aaPredicted RBP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 PRRT2Q7Z6L0 340 aaPredicted RBP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 NELFCDQ8IXH7 590 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 CCDC170Q8IYT3 715 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 DAW1Q8N136 415 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 NSUN6Q8TEA1 469 aaKnown RBP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 BAP1Q92560 729 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 DCPSQ96C86 337 aaKnown RBP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 SYT17Q9BSW7 474 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 DESI2Q9BSY9 194 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 MKNK1Q9BUB5 465 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 A1CFQ9NQ94 594 aaKnown RBP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 CYP39A1Q9NYL5 469 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 TBC1D7Q9P0N9 293 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 FZD1Q9UP38 647 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 PLAGL2Q9UPG8 496 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 KCNH4Q9UQ05 1017 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 EPN1Q9Y6I3 576 aaPredicted RBP9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 PLXNA1Q9UIW2 1896 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 MCM3APO60318 1980 aa9.99□□□□□ -0.81
LINCMD1-201ENST00000418518 ARHGEF35A5YM69 484 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 PES1O00541 588 aaKnown RBP9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 CXCL11O14625 94 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 TGFB1I1O43294 461 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 PPP1R12BO60237 982 aaPredicted RBP9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 PRPF6O94906 941 aaKnown RBP9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 NDUFA10O95299 355 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 CCNE2O96020 404 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 NR3C2P08235 984 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 KCNA2P16389 499 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 NR2F2P24468 414 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 ARHGAP25P42331 645 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 IREB2P48200 963 aaKnown RBP9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 RARRES1P49788 294 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 KLK7P49862 253 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 PPATQ06203 517 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 KCNMA1Q12791 1236 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 ADAM9Q13443 819 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 MYBPC2Q14324 1141 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 TSR1Q2NL82 804 aaKnown RBP9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 CCDC40Q4G0X9 1142 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 ARHGEF16Q5VV41 709 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 STXBP4Q6ZWJ1 553 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 ZNF720Q7Z2F6 126 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 NLRX1Q86UT6 975 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 RIOX2Q8IUF8 465 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 CREBRFQ8IUR6 639 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 SULF1Q8IWU6 871 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 BANK1Q8NDB2 785 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 ZNF397Q8NF99 534 aaPredicted RBP9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 DNERQ8NFT8 737 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 SYN2Q92777 582 aaPredicted RBP9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 EEF2KMTQ96G04 330 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 BORCS6Q96GS4 357 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 CDHR1Q96JP9 859 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 IWS1Q96ST2 819 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 CHP1Q99653 195 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 ST6GALNAC4Q9H4F1 302 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 METTL14Q9HCE5 456 aaKnown RBP9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 ANKEF1Q9NU02 776 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 AGPAT5Q9NUQ2 364 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 DMAC2Q9NW81 257 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 MYO1AQ9UBC5 1043 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 DNAI1Q9UI46 699 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 REXO2Q9Y3B8 237 aaKnown RBP9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 CSADQ9Y600 493 aa9.98□□□□□ -0.81
LINCMD1-201ENST00000418518 SPDYE5A6NIY4 337 aa9.97□□□□□ -0.81
LINCMD1-201ENST00000418518 EIF3CLB5ME19 914 aaKnown RBP9.97□□□□□ -0.81
LINCMD1-201ENST00000418518 ADM5C9JUS6 153 aa9.97□□□□□ -0.81
LINCMD1-201ENST00000418518 ZBTB39O15060 712 aa9.97□□□□□ -0.81
LINCMD1-201ENST00000418518 EPHB6O15197 1021 aa9.97□□□□□ -0.81
LINCMD1-201ENST00000418518 HIP1RO75146 1068 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms