RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 CCDC125Q86Z20 511 aa14.34□□□□□ -0.11
BDNF-208ENST00000418212 PALM2Q8IXS6 379 aa14.34□□□□□ -0.11
BDNF-208ENST00000418212 RAD54LQ92698 747 aa14.34□□□□□ -0.11
BDNF-208ENST00000418212 ABHD10Q9NUJ1 306 aa14.34□□□□□ -0.11
BDNF-208ENST00000418212 FMR1Q06787 632 aaKnown RBP eCLIP14.33□□□□□ -0.12
BDNF-208ENST00000418212 TROAPQ12815 778 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 SWSAP1Q6NVH7 229 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 CCDC170Q8IYT3 715 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 CCDC110Q8TBZ0 833 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 BCAS4Q8TDM0 211 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 RPS6KC1Q96S38 1066 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 TRIM9Q9C026 710 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 ATP8A1Q9Y2Q0 1164 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 MYO3BQ8WXR4 1341 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 ZNF233A6NK53 670 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 OSBPP22059 807 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 NFIAQ12857 509 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 MTMR3Q13615 1198 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 ZNF746Q6NUN9 644 aaPredicted RBP14.33□□□□□ -0.12
BDNF-208ENST00000418212 CYFIP1Q7L576 1253 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 NME8Q8N427 588 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 MAIP1Q8WWC4 291 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 CALN1Q9BXU9 219 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 DNAJC17Q9NVM6 304 aaKnown RBP14.33□□□□□ -0.12
BDNF-208ENST00000418212 GABBR1Q9UBS5 961 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 DNAJC12Q9UKB3 198 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 WDR64B1ANS9 1081 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 H7C0C1 242 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 ATP5OP48047 213 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 R3HDM1Q15032 1099 aaKnown RBP14.33□□□□□ -0.12
BDNF-208ENST00000418212 TRIP13Q15645 432 aaPredicted RBP14.33□□□□□ -0.12
BDNF-208ENST00000418212 STRIP1Q5VSL9 837 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 TAOK1Q7L7X3 1001 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 DHX40Q8IX18 779 aaKnown RBP14.33□□□□□ -0.12
BDNF-208ENST00000418212 MSTO1Q9BUK6 570 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 DAAM1Q9Y4D1 1078 aa14.33□□□□□ -0.12
BDNF-208ENST00000418212 SERPING1P05155 500 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 PRELPP51888 382 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 TRIM50Q86XT4 487 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 LXNQ9BS40 222 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 PHF20Q9BVI0 1012 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 SEPT10Q9P0V9 454 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 PVALEFA0A1B0GWK0 134 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 WTIPA6NIX2 430 aaPredicted RBP14.32□□□□□ -0.12
BDNF-208ENST00000418212 PDHBP11177 359 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 STX2P32856 288 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 NT5C2P49902 561 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 STK4Q13043 487 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 NSUN6Q8TEA1 469 aaKnown RBP14.32□□□□□ -0.12
BDNF-208ENST00000418212 SAAL1Q96ER3 474 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 SPZ1Q9BXG8 430 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.32□□□□□ -0.12
BDNF-208ENST00000418212 MAD1L1Q9Y6D9 718 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 PLEKHG2Q9H7P9 1386 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 AGLP35573 1532 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 SBK1Q52WX2 424 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 CEP55Q53EZ4 464 aa14.32□□□□□ -0.12
BDNF-208ENST00000418212 HERC5Q9UII4 1024 aaKnown RBP14.32□□□□□ -0.12
BDNF-208ENST00000418212 NPHP3-ACAD11A0A0J9YXS1 232 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 DENND3A2RUS2 1198 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 POC1B-GALNT4F8VUJ3 575 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 PGRMC1O00264 195 aaKnown RBP14.31□□□□□ -0.12
BDNF-208ENST00000418212 TLR3O15455 904 aaKnown RBP14.31□□□□□ -0.12
BDNF-208ENST00000418212 INPP5BP32019 993 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 QARSP47897 775 aaKnown RBP14.31□□□□□ -0.12
BDNF-208ENST00000418212 IQCB1Q15051 598 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 XXYLT1Q8NBI6 393 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 ZNF512BQ96KM6 892 aaPredicted RBP14.31□□□□□ -0.12
BDNF-208ENST00000418212 CEP63Q96MT8 703 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 JPH2Q9BR39 696 aaPredicted RBP14.31□□□□□ -0.12
BDNF-208ENST00000418212 TMEM39BQ9GZU3 492 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 AP5M1Q9H0R1 490 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 HOXC10Q9NYD6 342 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 CNOT7Q9UIV1 285 aaKnown RBP14.31□□□□□ -0.12
BDNF-208ENST00000418212 NMT1P30419 496 aaKnown RBP14.31□□□□□ -0.12
BDNF-208ENST00000418212 SLCO1A2P46721 670 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 GFPT1Q06210 699 aaPredicted RBP14.31□□□□□ -0.12
BDNF-208ENST00000418212 STXBP2Q15833 593 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 ANKRD40Q6AI12 368 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 B4GALNT4Q76KP1 1039 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 ANKRD36BP1Q96IX9 119 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 FAM213AQ9BRX8 229 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 KNOP1Q1ED39 458 aaKnown RBP14.31□□□□□ -0.12
BDNF-208ENST00000418212 C3orf67Q6ZVT6 689 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 PASD1Q8IV76 773 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 MICALL2Q8IY33 904 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 FBXO28Q9NVF7 368 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 NRXN1Q9ULB1 1477 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 PHLPP2Q6ZVD8 1323 aa14.31□□□□□ -0.12
BDNF-208ENST00000418212 POLR1AO95602 1720 aaPredicted RBP14.31□□□□□ -0.12
BDNF-208ENST00000418212 SAT1P21673 171 aa14.3□□□□□ -0.12
BDNF-208ENST00000418212 ZNF131P52739 623 aa14.3□□□□□ -0.12
BDNF-208ENST00000418212 MTMR2Q13614 643 aa14.3□□□□□ -0.12
BDNF-208ENST00000418212 SGO2Q562F6 1265 aa14.3□□□□□ -0.12
BDNF-208ENST00000418212 TMED8Q6PL24 325 aaPredicted RBP14.3□□□□□ -0.12
BDNF-208ENST00000418212 RSRC2Q7L4I2 434 aaKnown RBP14.3□□□□□ -0.12
BDNF-208ENST00000418212 EIF2AK1Q9BQI3 630 aaKnown RBP14.3□□□□□ -0.12
BDNF-208ENST00000418212 FEM1BQ9UK73 627 aa14.3□□□□□ -0.12
BDNF-208ENST00000418212 MAGED2Q9UNF1 606 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms