RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 GRK3P35626 688 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 MTERF2Q49AM1 385 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 EMC4Q5J8M3 183 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 TEPPQ6URK8 271 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 TMC5Q6UXY8 1006 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 RBM12BQ8IXT5 1001 aaKnown RBP5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 OSBP2Q969R2 916 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 CLIC6Q96NY7 704 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 CDC6Q99741 560 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 LNPKQ9C0E8 428 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 SMOC1Q9H4F8 434 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 DUSP10Q9Y6W6 482 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 NOS1P29475 1434 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 SPATA31D1Q6ZQQ2 1576 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 TMEM131LA2VDJ0 1609 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 C3P01024 1663 aa5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 CYP1A1P04798 512 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 HSPA5P11021 654 aaKnown RBP5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 GTF2F1P35269 517 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 ADAM9Q13443 819 aa5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 NTRK3Q16288 839 aa5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 NBPF8Q3BBV2 869 aa5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 RSPO2Q6UXX9 243 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 LBX2Q6XYB7 198 aa5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 SPATC1Q76KD6 591 aa5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 TRIM48Q8IWZ4 208 aa5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 PHOSPHO1Q8TCT1 267 aa5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 IPO9Q96P70 1041 aaKnown RBP5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 HIRIP3Q9BW71 556 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 SPATA9Q9BWV2 254 aa5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 L2HGDHQ9H9P8 463 aa5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 SLC6A20Q9NP91 592 aa5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 ARID4BQ4LE39 1312 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 KDM5AP29375 1690 aaKnown RBP5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 RIMS1Q86UR5 1692 aaKnown RBP5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 NEXMIFQ5QGS0 1516 aa5.18□□□□□ -1.58
HMGB3P20-201ENST00000417997 SETBP1Q9Y6X0 1596 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 MROH6A6NGR9 719 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 K7ESM1 405 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 PDPK1O15530 556 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 LRG1P02750 347 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 GPR85P60893 370 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 SSRP1Q08945 709 aaKnown RBP5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 SPIRE1Q08AE8 756 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 KIAA2012Q0VF49 1180 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 KIZQ2M2Z5 673 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 ZFYVE27Q5T4F4 411 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 BORAQ6PGQ7 559 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 IFNL3Q8IZI9 196 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 TXNDC5Q8NBS9 432 aaKnown RBP5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 ALG1Q9BT22 464 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 CARD11Q9BXL7 1154 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 CDIP1Q9H305 208 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 RBPJLQ9UBG7 517 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 ASH2LQ9UBL3 628 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 QRICH2Q9H0J4 1663 aa5.17□□□□□ -1.58
HMGB3P20-201ENST00000417997 MYO3AQ8NEV4 1616 aa5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 TUSC3Q13454 348 aa5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 FAM26FQ5R3K3 315 aa5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 PHF19Q5T6S3 580 aa5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 STYK1Q6J9G0 422 aa5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 DPH6Q7L8W6 267 aa5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 OTOP3Q7RTS5 596 aa5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 LCORQ96JN0 433 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 TMEM209Q96SK2 561 aa5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 TRAF6Q9Y4K3 522 aa5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 NUB1Q9Y5A7 615 aa5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 UBR1Q8IWV7 1749 aa5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 ARHGEF28Q8N1W1 1705 aaKnown RBP5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 ZNF536O15090 1300 aa5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 EIF3AQ14152 1382 aaKnown RBP5.16□□□□□ -1.58
HMGB3P20-201ENST00000417997 FAM47E-STBD1D6RA91 191 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 NKRFO15226 690 aaKnown RBP eCLIP5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 CYP7B1O75881 506 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 LTFP02788 710 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 SOD2P04179 222 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 IL13P35225 146 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 VASNQ6EMK4 673 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 CYP4F22Q6NT55 531 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 TRMT10BQ6PF06 316 aaKnown RBP5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 MTDHQ86UE4 582 aaKnown RBP5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 LGI4Q8N135 537 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 CLEC4DQ8WXI8 215 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 ZFYVE21Q9BQ24 234 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 POLR3GLQ9BT43 218 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 TMEM168Q9H0V1 697 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 IPPKQ9H8X2 491 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 DSEQ9UL01 958 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 INVSQ9Y283 1065 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 GPRASP1Q5JY77 1395 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 CCDC7Q96M83 1385 aa5.15□□□□□ -1.59
HMGB3P20-201ENST00000417997 SCAF11Q99590 1463 aaKnown RBP5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 NRXN1Q9ULB1 1477 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 TRBV23-1A0A0A0MS06 115 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 ZNF28P17035 718 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 GLRBP48167 497 aa5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 MLLT6P55198 1093 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 DDX10Q13206 875 aaKnown RBP5.14□□□□□ -1.59
HMGB3P20-201ENST00000417997 RASGRF1Q13972 1273 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms