RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 ITGB5P18084 799 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 AVPR2P30518 371 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TCF15Q12870 199 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PAK2Q13177 524 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 MTMR1Q13613 665 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SPOUT1Q5T280 376 aaKnown RBP9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PDE12Q6L8Q7 609 aaKnown RBP9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 NME8Q8N427 588 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 NCOA7Q8NI08 942 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 CTCFLQ8NI51 663 aaPredicted RBP9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 LINC01599Q8WXQ3 324 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 CDCA3Q99618 268 aaPredicted RBP9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SPZ1Q9BXG8 430 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 CELF4Q9BZC1 486 aaKnown RBP9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SENP2Q9HC62 589 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 BARX2Q9UMQ3 279 aaPredicted RBP9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PCDHB7Q9Y5E2 793 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PCDHA2Q9Y5H9 948 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TRPV2Q9Y5S1 764 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ZFHX2Q9C0A1 2572 aaPredicted RBP9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 IGSF9BQ9UPX0 1349 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SPDYE3A6NKU9 549 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PER2O15055 1255 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 GFRA3O60609 400 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 CYP21A2P08686 494 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SRGAP2BP0DMP2 458 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SARSP49591 514 aaKnown RBP9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 GNAQP50148 359 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 NUBP1P53384 320 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 KRT76Q01546 638 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TMEM62Q0P6H9 643 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ODR4Q5SWX8 454 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PLPPR4Q7Z2D5 763 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 IGDCC4Q8TDY8 1250 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ATP8B4Q8TF62 1192 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 RUFY2Q8WXA3 655 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SUSD6Q92537 303 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ATOH1Q92858 354 aaPredicted RBP9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 NEK1Q96PY6 1258 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PLXNA4Q9HCM2 1894 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 JPH1Q9HDC5 661 aaPredicted RBP9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 JADE2Q9NQC1 790 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TLR9Q9NR96 1032 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PKD2L1Q9P0L9 805 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TRPC6Q9Y210 931 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 UBIAD1Q9Y5Z9 338 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 KDM3AQ9Y4C1 1321 aa9.01□□□□□ -0.97
HLA-DPA1-241ENST00000417724 FNDC1Q4ZHG4 1894 aaPredicted RBP9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 KMT2EQ8IZD2 1858 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SMIM35A0A1B0GVV1 85 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 DENND3A2RUS2 1198 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 E7EWF7 191 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 FGF18O76093 207 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 DDAH1O94760 285 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 GATMP50440 423 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 STAT5BP51692 787 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 FOXK2Q01167 660 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 NFX1Q12986 1120 aaKnown RBP9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PLCB4Q15147 1175 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PTPN21Q16825 1174 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 DUSP6Q16828 381 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TMEM184AQ6ZMB5 413 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SLC24A5Q71RS6 500 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ZBTB33Q86T24 672 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 THNSL1Q8IYQ7 743 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TMTC2Q8N394 836 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ZBTB10Q96DT7 871 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ASIC4Q96FT7 647 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PCYT2Q99447 389 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SDF4Q9BRK5 362 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 IL25Q9H293 177 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TMX1Q9H3N1 280 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 C1orf112Q9NSG2 853 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TMEM260Q9NX78 707 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SLC9A2Q9UBY0 812 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PUF60Q9UHX1 559 aaKnown RBP9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PCDHGC5Q9Y5F6 944 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 EVPLQ92817 2033 aa9□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TBKBP1A7MCY6 615 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 GPR182O15218 404 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 RPS6KA5O75582 802 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 IGHDP01880 384 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 HOXB8P17481 243 aaPredicted RBP8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 IBSPP21815 317 aaPredicted RBP8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 KLRC1P26715 233 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 SLC26A2P50443 739 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 VCPP55072 806 aaKnown RBP8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ERVFC1P60507 584 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TMEM266Q2M3C6 531 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 MTHFD1LQ6UB35 978 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ZNF654Q8IZM8 581 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 RASGRP4Q8TDF6 673 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 TRAPPC12Q8WVT3 735 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 ADAM2Q99965 735 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 MTA3Q9BTC8 594 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 S1PR5Q9H228 398 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 RGS18Q9NS28 235 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 KCNH7Q9NS40 1196 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 FAM86C1Q9NVL1 165 aa8.99□□□□□ -0.97
HLA-DPA1-241ENST00000417724 PCDHA6Q9UN73 950 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms