RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 KRT40Q6A162 431 aa20.93■□□□□ 0.94
VPS16-204ENST00000417508 TRIM22Q8IYM9 498 aa20.93■□□□□ 0.94
VPS16-204ENST00000417508 FAM177A1Q8N128 213 aaPredicted RBP20.93■□□□□ 0.94
VPS16-204ENST00000417508 GDPD5Q8WTR4 605 aa20.93■□□□□ 0.94
VPS16-204ENST00000417508 HLA-CQ95604 372 aa20.93■□□□□ 0.94
VPS16-204ENST00000417508 IL17RAQ96F46 866 aa20.93■□□□□ 0.94
VPS16-204ENST00000417508 ZNF577Q9BSK1 485 aa20.93■□□□□ 0.94
VPS16-204ENST00000417508 SLC26A6Q9BXS9 759 aa20.93■□□□□ 0.94
VPS16-204ENST00000417508 MTUS1Q9ULD2 1270 aa20.93■□□□□ 0.94
VPS16-204ENST00000417508 MYH9P35579 1960 aaKnown RBP20.93■□□□□ 0.94
VPS16-204ENST00000417508 TTC3P53804 2025 aa20.93■□□□□ 0.94
VPS16-204ENST00000417508 BRWD1Q9NSI6 2320 aa20.92■□□□□ 0.94
VPS16-204ENST00000417508 ENPP3O14638 875 aa20.92■□□□□ 0.94
VPS16-204ENST00000417508 BMP1P13497 986 aa20.92■□□□□ 0.94
VPS16-204ENST00000417508 USP11P51784 963 aa20.92■□□□□ 0.94
VPS16-204ENST00000417508 ZNF484Q5JVG2 852 aa20.92■□□□□ 0.94
VPS16-204ENST00000417508 ZNF746Q6NUN9 644 aaPredicted RBP20.92■□□□□ 0.94
VPS16-204ENST00000417508 SMAP1Q8IYB5 467 aaPredicted RBP20.92■□□□□ 0.94
VPS16-204ENST00000417508 ADAMTS19Q8TE59 1207 aa20.92■□□□□ 0.94
VPS16-204ENST00000417508 ATP8B4Q8TF62 1192 aa20.92■□□□□ 0.94
VPS16-204ENST00000417508 FTHL17Q9BXU8 183 aa20.92■□□□□ 0.94
VPS16-204ENST00000417508 ZNF302Q9NR11 478 aa20.92■□□□□ 0.94
VPS16-204ENST00000417508 TCEAL9Q9UHQ7 104 aa20.92■□□□□ 0.94
VPS16-204ENST00000417508 COL1A2P08123 1366 aa20.92■□□□□ 0.94
VPS16-204ENST00000417508 CCT2P78371 535 aaKnown RBP20.91■□□□□ 0.94
VPS16-204ENST00000417508 KRT76Q01546 638 aa20.91■□□□□ 0.94
VPS16-204ENST00000417508 COL4A6Q14031 1691 aa20.91■□□□□ 0.94
VPS16-204ENST00000417508 TOB2Q14106 344 aaPredicted RBP20.91■□□□□ 0.94
VPS16-204ENST00000417508 PTPROQ16827 1216 aa20.91■□□□□ 0.94
VPS16-204ENST00000417508 EPC2Q52LR7 807 aa20.91■□□□□ 0.94
VPS16-204ENST00000417508 PDXDC2PQ6P474 469 aa20.91■□□□□ 0.94
VPS16-204ENST00000417508 MTHFD1LQ6UB35 978 aa20.91■□□□□ 0.94
VPS16-204ENST00000417508 C17orf80Q9BSJ5 609 aa20.91■□□□□ 0.94
VPS16-204ENST00000417508 CELF4Q9BZC1 486 aaKnown RBP20.91■□□□□ 0.94
VPS16-204ENST00000417508 C22orf23Q9BZE7 217 aa20.91■□□□□ 0.94
VPS16-204ENST00000417508 FAM49AQ9H0Q0 323 aaPredicted RBP20.91■□□□□ 0.94
VPS16-204ENST00000417508 KDM3AQ9Y4C1 1321 aa20.91■□□□□ 0.94
VPS16-204ENST00000417508 TRPV2Q9Y5S1 764 aa20.91■□□□□ 0.94
VPS16-204ENST00000417508 DDX39AO00148 427 aaKnown RBP20.9■□□□□ 0.94
VPS16-204ENST00000417508 KLRC1P26715 233 aa20.9■□□□□ 0.94
VPS16-204ENST00000417508 SSRP1Q08945 709 aaKnown RBP20.9■□□□□ 0.94
VPS16-204ENST00000417508 SWSAP1Q6NVH7 229 aa20.9■□□□□ 0.94
VPS16-204ENST00000417508 CPLX2Q6PUV4 134 aaKnown RBP20.9■□□□□ 0.94
VPS16-204ENST00000417508 TMEM192Q8IY95 271 aa20.9■□□□□ 0.94
VPS16-204ENST00000417508 UHRF1Q96T88 793 aaPredicted RBP20.9■□□□□ 0.94
VPS16-204ENST00000417508 RWDD3Q9Y3V2 267 aa20.9■□□□□ 0.94
VPS16-204ENST00000417508 PCDHA10Q9Y5I2 948 aa20.9■□□□□ 0.94
VPS16-204ENST00000417508 MAFBQ9Y5Q3 323 aaPredicted RBP20.9■□□□□ 0.94
VPS16-204ENST00000417508 VCANP13611 3396 aa20.89■□□□□ 0.94
VPS16-204ENST00000417508 EVPLQ92817 2033 aa20.89■□□□□ 0.93
VPS16-204ENST00000417508 H3BNC9 293 aa20.89■□□□□ 0.93
VPS16-204ENST00000417508 CPLX1O14810 134 aa20.89■□□□□ 0.93
VPS16-204ENST00000417508 RB1P06400 928 aa20.89■□□□□ 0.93
VPS16-204ENST00000417508 PSAPP07602 524 aa20.89■□□□□ 0.93
VPS16-204ENST00000417508 NLRP5P59047 1200 aa20.89■□□□□ 0.93
VPS16-204ENST00000417508 TFF2Q03403 129 aa20.89■□□□□ 0.93
VPS16-204ENST00000417508 PRR16Q569H4 304 aa20.89■□□□□ 0.93
VPS16-204ENST00000417508 ERICH6BQ5W0A0 696 aa20.89■□□□□ 0.93
VPS16-204ENST00000417508 CCDC60Q8IWA6 550 aaPredicted RBP20.89■□□□□ 0.93
VPS16-204ENST00000417508 FIBCD1Q8N539 461 aa20.89■□□□□ 0.93
VPS16-204ENST00000417508 TRAPPC12Q8WVT3 735 aa20.89■□□□□ 0.93
VPS16-204ENST00000417508 BBXQ8WY36 941 aaPredicted RBP20.89■□□□□ 0.93
VPS16-204ENST00000417508 MRPL38Q96DV4 380 aaKnown RBP20.89■□□□□ 0.93
VPS16-204ENST00000417508 AGO3Q9H9G7 860 aaKnown RBP20.89■□□□□ 0.93
VPS16-204ENST00000417508 NCOA5Q9HCD5 579 aaKnown RBP20.89■□□□□ 0.93
VPS16-204ENST00000417508 TCF20Q9UGU0 1960 aaKnown RBP20.88■□□□□ 0.93
VPS16-204ENST00000417508 IGSF9BQ9UPX0 1349 aa20.88■□□□□ 0.93
VPS16-204ENST00000417508 ADAMTS3O15072 1205 aa20.88■□□□□ 0.93
VPS16-204ENST00000417508 DEXIO95424 95 aa20.88■□□□□ 0.93
VPS16-204ENST00000417508 ODR4Q5SWX8 454 aa20.88■□□□□ 0.93
VPS16-204ENST00000417508 VPS54Q9P1Q0 977 aa20.88■□□□□ 0.93
VPS16-204ENST00000417508 COL4A4P53420 1690 aaPredicted RBP20.88■□□□□ 0.93
VPS16-204ENST00000417508 LOXHD1Q8IVV2 1947 aa20.88■□□□□ 0.93
VPS16-204ENST00000417508 CD52P31358 61 aa20.87■□□□□ 0.93
VPS16-204ENST00000417508 GPM6BQ13491 265 aa20.87■□□□□ 0.93
VPS16-204ENST00000417508 GALNT17Q6IS24 598 aa20.87■□□□□ 0.93
VPS16-204ENST00000417508 ZBTB10Q96DT7 871 aa20.87■□□□□ 0.93
VPS16-204ENST00000417508 RIT2Q99578 217 aa20.87■□□□□ 0.93
VPS16-204ENST00000417508 PDRG1Q9NUG6 133 aa20.87■□□□□ 0.93
VPS16-204ENST00000417508 RNF216Q9NWF9 866 aaPredicted RBP20.87■□□□□ 0.93
VPS16-204ENST00000417508 PADI3Q9ULW8 664 aa20.87■□□□□ 0.93
VPS16-204ENST00000417508 CEP131Q9UPN4 1083 aa20.87■□□□□ 0.93
VPS16-204ENST00000417508 BDP1A6H8Y1 2624 aa20.87■□□□□ 0.93
VPS16-204ENST00000417508 RALGAPA2Q2PPJ7 1873 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 C5orf67F2Z3F1 127 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 STAG3L1P0CL83 205 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 ATP4AP20648 1035 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 PAK2Q13177 524 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 CKAP2LQ8IYA6 745 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 KIAA0319LQ8IZA0 1049 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 ZNF710Q8N1W2 664 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 RASGRP4Q8TDF6 673 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 LENG9Q96B70 501 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 ZNF689Q96CS4 500 aaPredicted RBP20.86■□□□□ 0.93
VPS16-204ENST00000417508 FAM167AQ96KS9 214 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 PPP4R2Q9NY27 417 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 PCDHA4Q9UN74 947 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 NLRC5Q86WI3 1866 aa20.86■□□□□ 0.93
VPS16-204ENST00000417508 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.85■□□□□ 0.93
VPS16-204ENST00000417508 WDR64B1ANS9 1081 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms