RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 PYM1Q9BRP8 204 aaKnown RBP3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 GPATCH1Q9BRR8 931 aaKnown RBP3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 DESI2Q9BSY9 194 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 APOL5Q9BWW9 433 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 ARHGAP39Q9C0H5 1083 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 BTBD1Q9H0C5 482 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 C2orf40Q9H1Z8 148 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 BHMT2Q9H2M3 363 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 SMOC1Q9H4F8 434 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 RPAP3Q9H6T3 665 aaPredicted RBP3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 YY1AP1Q9H869 796 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 PREBQ9HCU5 417 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 VPS45Q9NRW7 570 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 TOMM22Q9NS69 142 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 KRT84Q9NSB2 600 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 LRRC4BQ9NT99 713 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 TOR4AQ9NXH8 423 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 AIPL1Q9NZN9 384 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 SAMD15Q9P1V8 674 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 CEP72Q9P209 647 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 ZNF214Q9UL59 606 aaPredicted RBP3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 PCDHB10Q9UN67 800 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 L1RE1Q9UN81 338 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 BCS1LQ9Y276 419 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 ZNF711Q9Y462 761 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 TRIM17Q9Y577 477 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 PCDHB5Q9Y5E4 795 aa3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 GPC6Q9Y625 555 aaPredicted RBP3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 EIF4G1Q04637 1599 aaKnown RBP3.5□□□□□ -1.85
CTDSPL-203ENST00000416688 ABCC9O60706 1549 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PI4KAP2A4QPH2 592 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 CAPN8A6NHC0 703 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ZNF891A8MT65 544 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 H0Y626 953 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 NOP56O00567 594 aaKnown RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 AQP7O14520 342 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 SGSM2O43147 1006 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PCDHGA12O60330 932 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 TSC22D2O75157 780 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 E2F6O75461 281 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 TSPAN9O75954 239 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 URI1O94763 535 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 CAPNS1P04632 268 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 POU2F2P09086 479 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 NME1P15531 152 aaKnown RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 FERP16591 822 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PAMP19021 973 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 HDCP19113 662 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 HLA-DPA1P20036 260 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 CD86P42081 329 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 LIFRP42702 1097 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ALDH3A2P51648 485 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 CASP5P51878 434 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ADKP55263 362 aaKnown RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 VAMP2P63027 116 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 NRG1Q02297 640 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 DSG1Q02413 1049 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 KCNC4Q03721 635 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 AP1B1Q10567 949 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 FOXO1Q12778 655 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 MAPK7Q13164 816 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 LRRC32Q14392 662 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ARID5BQ14865 1188 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 POLD3Q15054 466 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 OASLQ15646 514 aaKnown RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 TRIP4Q15650 581 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ZYXQ15942 572 aaKnown RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ADCK5Q3MIX3 580 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 C4orf48Q5BLP8 95 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ZMYM1Q5SVZ6 1142 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PEAR1Q5VY43 1037 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ALKBH5Q6P6C2 394 aaKnown RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 CTR9Q6PD62 1173 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 LILRA6Q6PI73 481 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 TTLL7Q6ZT98 887 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 SYDE1Q6ZW31 735 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 BEND5Q7L4P6 421 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 NLRC3Q7RTR2 1065 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 NLRP13Q86W25 1043 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 HEATR4Q86WZ0 1026 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 CCNJLQ8IV13 435 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 TBC1D21Q8IYX1 336 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 KIAA0319LQ8IZA0 1049 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 CACNA2D3Q8IZS8 1091 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 OR8H3Q8N146 312 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 NXPE1Q8N323 547 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 TCP11L2Q8N4U5 519 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ANKRD52Q8NB46 1076 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ANKRD20A12PQ8NF67 263 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 GOT1L1Q8NHS2 421 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ZSCAN18Q8TBC5 510 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 RHPN1Q8TCX5 695 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 DENND1AQ8TEH3 1009 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ZDHHC1Q8WTX9 485 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 KLHL6Q8WZ60 621 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 USP6NLQ92738 828 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 SLC5A5Q92911 643 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 CNKSR1Q969H4 720 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 OSBP2Q969R2 916 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 CFAP36Q96G28 342 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 1680.8 ms