RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 TMEM110-MUSTN1A8MSY1 372 aa12.6□□□□□ -0.39
SCN4B-202ENST00000415030 TMOD1P28289 359 aa12.6□□□□□ -0.39
SCN4B-202ENST00000415030 PCK1P35558 622 aa12.6□□□□□ -0.39
SCN4B-202ENST00000415030 CCDC6Q16204 474 aa12.6□□□□□ -0.39
SCN4B-202ENST00000415030 ANKRD20A8PQ5CZ79 823 aa12.6□□□□□ -0.39
SCN4B-202ENST00000415030 MIIPQ5JXC2 388 aa12.6□□□□□ -0.39
SCN4B-202ENST00000415030 VSIG1Q86XK7 387 aa12.6□□□□□ -0.39
SCN4B-202ENST00000415030 PAGR1Q9BTK6 254 aa12.6□□□□□ -0.39
SCN4B-202ENST00000415030 ATP6V0A4Q9HBG4 840 aa12.6□□□□□ -0.39
SCN4B-202ENST00000415030 FRMD4BQ9Y2L6 1034 aa12.6□□□□□ -0.39
SCN4B-202ENST00000415030 MYMKA6NI61 221 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 PODXLO00592 558 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 RASGRF2O14827 1237 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 PPIP5K2O43314 1243 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 LCA5LO95447 670 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 IFNAR2P48551 515 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 COBLL1Q53SF7 1204 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 NAALADL2Q58DX5 795 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 ZNF34Q8IZ26 560 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 SYCP3Q8IZU3 236 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 OR2W6PQ8NHA6 318 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 RAPGEF5Q92565 580 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 HPS3Q969F9 1004 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 RIOK1Q9BRS2 568 aaKnown RBP12.59□□□□□ -0.39
SCN4B-202ENST00000415030 SPZ1Q9BXG8 430 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 AMACRQ9UHK6 382 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 STK38LQ9Y2H1 464 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 TRAPPC3O43617 180 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 STX2P32856 288 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 RASSF2P50749 326 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 PMS2P54278 862 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 KCNH2Q12809 1159 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 FUKQ8N0W3 1084 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 SAP30BPQ9UHR5 308 aaKnown RBP12.59□□□□□ -0.39
SCN4B-202ENST00000415030 SPATA31A6Q5VVP1 1343 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 SPOPO43791 374 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 IRX1P78414 480 aaPredicted RBP12.59□□□□□ -0.39
SCN4B-202ENST00000415030 TGFBRAP1Q8WUH2 860 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 PASKQ96RG2 1323 aa12.59□□□□□ -0.39
SCN4B-202ENST00000415030 PHF20L1A8MW92 1017 aa12.58□□□□□ -0.39
SCN4B-202ENST00000415030 STXBP3O00186 592 aa12.58□□□□□ -0.39
SCN4B-202ENST00000415030 USP17L8P0C7I0 530 aa12.58□□□□□ -0.39
SCN4B-202ENST00000415030 CYP2D6P10635 497 aa12.58□□□□□ -0.39
SCN4B-202ENST00000415030 ABCB4P21439 1286 aa12.58□□□□□ -0.39
SCN4B-202ENST00000415030 MYO1EQ12965 1108 aa12.58□□□□□ -0.39
SCN4B-202ENST00000415030 IL17AQ16552 155 aa12.58□□□□□ -0.39
SCN4B-202ENST00000415030 CCDC38Q502W7 563 aa12.58□□□□□ -0.39
SCN4B-202ENST00000415030 BSDC1Q9NW68 430 aaPredicted RBP12.58□□□□□ -0.39
SCN4B-202ENST00000415030 PCDHGC5Q9Y5F6 944 aa12.58□□□□□ -0.39
SCN4B-202ENST00000415030 WNT7AO00755 349 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 AGTP01019 485 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 EN1Q05925 392 aaPredicted RBP12.58□□□□□ -0.4
SCN4B-202ENST00000415030 SF3A3Q12874 501 aaKnown RBP eCLIP12.58□□□□□ -0.4
SCN4B-202ENST00000415030 DHX34Q14147 1143 aaKnown RBP12.58□□□□□ -0.4
SCN4B-202ENST00000415030 KIAA1024Q9UPX6 916 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 BCRP11274 1271 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 ITIH4Q14624 930 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 GRIPAP1Q4V328 841 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 NIM1KQ8IY84 436 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 SLFN12Q8IYM2 578 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 MAIP1Q8WWC4 291 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 PAIP2Q9BPZ3 127 aaKnown RBP12.58□□□□□ -0.4
SCN4B-202ENST00000415030 TMEM47Q9BQJ4 181 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 FAM205AQ6ZU69 1335 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 ZSCAN5CA6NGD5 496 aaPredicted RBP12.58□□□□□ -0.4
SCN4B-202ENST00000415030 GFPT2O94808 682 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 ZBTB7AO95365 584 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 AP1ARQ63HQ0 302 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 PIGSQ96S52 555 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 NOD2Q9HC29 1040 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 DISP2A7MBM2 1401 aa12.58□□□□□ -0.4
SCN4B-202ENST00000415030 ASPRV1Q53RT3 343 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 MAPKAPK5Q8IW41 473 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 MGARPQ8TDB4 240 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 SUCLA2Q9P2R7 463 aaPredicted RBP12.57□□□□□ -0.4
SCN4B-202ENST00000415030 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCN4B-202ENST00000415030 PCDHB13Q9Y5F0 798 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 USP17L3A6NCW0 530 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 USP17L4A6NCW7 530 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 ZNF263O14978 683 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 DNAJC8O75937 253 aaPredicted RBP12.57□□□□□ -0.4
SCN4B-202ENST00000415030 PLA2G4BP0C869 781 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 DPY19L2Q6NUT2 758 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 USP17L1Q7RTZ2 530 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 KIAA0895Q8NCT3 520 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 NKX2-3Q8TAU0 364 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 MAGEC3Q8TD91 643 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 VTI1AQ96AJ9 217 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 GPCPD1Q9NPB8 672 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 ASIC3Q9UHC3 531 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 KIF1AQ12756 1690 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 LAMA4Q16363 1823 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 A0A087X0T9 212 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 MIF4GDA9UHW6 222 aaKnown RBP12.57□□□□□ -0.4
SCN4B-202ENST00000415030 KCNQ2O43526 872 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 GCNT3O95395 438 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 FAM228BP0C875 321 aa12.57□□□□□ -0.4
SCN4B-202ENST00000415030 FXR2P51116 673 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCN4B-202ENST00000415030 SLC8A3P57103 927 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms