RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 SSRP1Q08945 709 aaKnown RBP9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 ME3Q16798 604 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 PSRC1Q6PGN9 363 aaPredicted RBP9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 SERINC5Q86VE9 423 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 LMBR1Q8WVP7 490 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 CDHR1Q96JP9 859 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 FAM161BQ96MY7 647 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 GUCD1Q96NT3 240 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 GLT8D2Q9H1C3 349 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 EHMT1Q9H9B1 1298 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 SETD4Q9NVD3 440 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 NFASCO94856 1347 aa9.73□□□□□ -0.85
HERPUD2-203ENST00000413517 DDX39AO00148 427 aaKnown RBP9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 CPLX1O14810 134 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 NBNO60934 754 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 LGR5O75473 907 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 FGBP02675 491 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 SELPP16109 830 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 MARK3P27448 753 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 CIITAP33076 1130 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 NEK4P51957 841 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 ACTR2P61160 394 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 PTK7Q13308 1070 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 BFSP2Q13515 415 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 ZNF618Q5T7W0 954 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 LRRC8DQ7L1W4 858 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 NIPA1Q7RTP0 329 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 PLA2G4DQ86XP0 818 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 TRIM22Q8IYM9 498 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 GIMAP8Q8ND71 665 aaPredicted RBP9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 CCDC148Q8NFR7 591 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 CAGE1Q8TC20 777 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 AFAP1L1Q8TED9 768 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 CCDC12Q8WUD4 166 aaPredicted RBP9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 SEPT1Q8WYJ6 367 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 ZBTB10Q96DT7 871 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 SLKQ9H2G2 1235 aaPredicted RBP9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 JPH1Q9HDC5 661 aaPredicted RBP9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 SH3GLB2Q9NR46 395 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 SLC9A2Q9UBY0 812 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 KCNJ14Q9UNX9 436 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 EMSYQ7Z589 1322 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 STK36Q9NRP7 1315 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 BRWD1Q9NSI6 2320 aa9.72□□□□□ -0.85
HERPUD2-203ENST00000413517 PRRC2BQ5JSZ5 2229 aaKnown RBP9.71□□□□□ -0.85
HERPUD2-203ENST00000413517 ARID2Q68CP9 1835 aa9.71□□□□□ -0.85
HERPUD2-203ENST00000413517 NLRC5Q86WI3 1866 aa9.71□□□□□ -0.85
HERPUD2-203ENST00000413517 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 C17orf102A2RUQ5 167 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 MAFGO15525 162 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 JAK2O60674 1132 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 ATG7O95352 703 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 DNAJB2P25686 324 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 GNA11P29992 359 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 CLCN6P51797 869 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 NLRP5P59047 1200 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 RUFY4Q6ZNE9 571 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 CCDC60Q8IWA6 550 aaPredicted RBP9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 DAGLBQ8NCG7 672 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 ATP6V0A1Q93050 837 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 GTF3C6Q969F1 213 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 GJA10Q969M2 543 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 PHF20Q9BVI0 1012 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 PBX4Q9BYU1 374 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 PCDHA4Q9UN74 947 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 YBX2Q9Y2T7 364 aaKnown RBP9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 ATG2AQ2TAZ0 1938 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 TTC3P53804 2025 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 MYO7AQ13402 2215 aa9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 COL4A4P53420 1690 aaPredicted RBP9.71□□□□□ -0.86
HERPUD2-203ENST00000413517 IGKV6D-21A0A0A0MT36 114 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 MBLAC1A4D2B0 266 aaPredicted RBP9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 FAM205CA6NFA0 338 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 ARHGEF15O94989 841 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 TDP2O95551 362 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 CXCL10P02778 98 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 CTSHP09668 335 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 MYOGP15173 224 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 ZNF76P36508 570 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 RABGGTBP53611 331 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 GRIK4Q16099 956 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 PRR16Q569H4 304 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 EARS2Q5JPH6 523 aaKnown RBP9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 MARCH8Q5T0T0 291 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 C6orf132Q5T0Z8 1188 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 ABHD15Q6UXT9 468 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 TMCO2Q7Z6W1 182 aaPredicted RBP9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 RPUSD2Q8IZ73 545 aaKnown RBP9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 BLIDQ8IZY5 108 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 NSUN7Q8NE18 718 aaKnown RBP9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 TBCKQ8TEA7 893 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 TRAPPC12Q8WVT3 735 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 SEMA6BQ9H3T3 888 aa9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 ORC3Q9UBD5 711 aaPredicted RBP9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 ZNF215Q9UL58 517 aaPredicted RBP9.7□□□□□ -0.86
HERPUD2-203ENST00000413517 ZBBXA8MT70 800 aa9.69□□□□□ -0.86
HERPUD2-203ENST00000413517 IPO5O00410 1097 aaKnown RBP9.69□□□□□ -0.86
HERPUD2-203ENST00000413517 MSH4O15457 936 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms