RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 LRRC10BA6NIK2 292 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 TMEM88BA6NKF7 163 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 ZNF862O60290 1169 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 DKC1O60832 514 aaKnown RBP eCLIP9.16□□□□□ -0.94
HDAC9-207ENST00000413509 ARIH2O95376 493 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 SSBP05455 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
HDAC9-207ENST00000413509 PSAPP07602 524 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 HOXC6P09630 235 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 YWHABP31946 246 aaKnown RBP9.16□□□□□ -0.94
HDAC9-207ENST00000413509 SREBF2Q12772 1141 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 NEDD9Q14511 834 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 KLHL10Q6JEL2 608 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 METTL7BQ6UX53 244 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 GPR142Q7Z601 462 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 PLEKHH3Q7Z736 793 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 CCDC60Q8IWA6 550 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-207ENST00000413509 DAW1Q8N136 415 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 MSL3Q8N5Y2 521 aaKnown RBP9.16□□□□□ -0.94
HDAC9-207ENST00000413509 GLIS3Q8NEA6 775 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 AFAP1L1Q8TED9 768 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 USP6NLQ92738 828 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 ATP6V0A1Q93050 837 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 HPS3Q969F9 1004 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 FIZ1Q96SL8 496 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 STRA6Q9BX79 667 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 FGFBP2Q9BYJ0 223 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 TRIM5Q9C035 493 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 SEMA6BQ9H3T3 888 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 THAP9Q9H5L6 903 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 VTA1Q9NP79 307 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 SLC39A2Q9NP94 309 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 PDLIM7Q9NR12 457 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 SAMSN1Q9NSI8 373 aaKnown RBP9.16□□□□□ -0.94
HDAC9-207ENST00000413509 INTS13Q9NVM9 706 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 SEL1LQ9UBV2 794 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 LIMA1Q9UHB6 759 aaKnown RBP9.16□□□□□ -0.94
HDAC9-207ENST00000413509 DDX41Q9UJV9 622 aaKnown RBP9.16□□□□□ -0.94
HDAC9-207ENST00000413509 TELO2Q9Y4R8 837 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 COL4A3BPQ9Y5P4 624 aa9.16□□□□□ -0.94
HDAC9-207ENST00000413509 MAFBQ9Y5Q3 323 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-207ENST00000413509 MGAMO43451 1857 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 UBE4BO95155 1302 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 A0A1B0GTH6 734 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 GSTTP1A0A1W2PQM5 241 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 ARHGEF35A5YM69 484 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 RSPH10B2B2RC85 870 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 EIF3DO15371 548 aaKnown RBP eCLIP9.15□□□□□ -0.94
HDAC9-207ENST00000413509 CBFA2T2O43439 604 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 TLR2O60603 784 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 LGR5O75473 907 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 PPP1R37O75864 691 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 TOMM70O94826 608 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 RSPH10BP0C881 870 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 MAPTP10636 758 aaKnown RBP9.15□□□□□ -0.94
HDAC9-207ENST00000413509 IDEP14735 1019 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 HOXD13P35453 343 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 STX17P56962 302 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 LRRC63Q05C16 580 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 HERC4Q5GLZ8 1057 aaPredicted RBP9.15□□□□□ -0.94
HDAC9-207ENST00000413509 CELF3Q5SZQ8 465 aaKnown RBP9.15□□□□□ -0.94
HDAC9-207ENST00000413509 TAPT1Q6NXT6 567 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 MIS18BP1Q6P0N0 1132 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 PADI6Q6TGC4 694 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 LRRC55Q6ZSA7 311 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 SEPT14Q6ZU15 432 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 ANO5Q75V66 913 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 ARMCX2Q7L311 632 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 CYFIP1Q7L576 1253 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 SFR1Q86XK3 245 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 MYOCDQ8IZQ8 938 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 SCFD2Q8WU76 684 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 SCFD1Q8WVM8 642 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 KCNN1Q92952 543 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 EMID1Q96A84 441 aaPredicted RBP9.15□□□□□ -0.94
HDAC9-207ENST00000413509 CEP89Q96ST8 783 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 PCYT2Q99447 389 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 XPO4Q9C0E2 1151 aaKnown RBP9.15□□□□□ -0.94
HDAC9-207ENST00000413509 KCTD10Q9H3F6 313 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 IFNKQ9P0W0 207 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 MAPK8IP1Q9UQF2 711 aa9.15□□□□□ -0.94
HDAC9-207ENST00000413509 THSD7BQ9C0I4 1608 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 TRIM49BA6NDI0 452 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 BACH1O14867 736 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 TBCAO75347 108 aaKnown RBP9.14□□□□□ -0.95
HDAC9-207ENST00000413509 SNAI1O95863 264 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-207ENST00000413509 HOXD8P13378 290 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-207ENST00000413509 ATP4AP20648 1035 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 EEF1GP26641 437 aaKnown RBP9.14□□□□□ -0.95
HDAC9-207ENST00000413509 PBX1P40424 430 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 CASP5P51878 434 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 PRKCEQ02156 737 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 SPAG1Q07617 926 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 NR1I3Q14994 352 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 TAF1CQ15572 869 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-207ENST00000413509 NFIL3Q16649 462 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 XKR3Q5GH77 459 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 TCP11X2Q5H9J9 407 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 ANKRD40Q6AI12 368 aa9.14□□□□□ -0.95
HDAC9-207ENST00000413509 FBXO16Q8IX29 292 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-207ENST00000413509 ZNF507Q8TCN5 953 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms