RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 KRT1P04264 644 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 MYCLP12524 364 aaPredicted RBP7.9□□□□□ -1.14
PTPN3-203ENST00000412145 HLA-DPA1P20036 260 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 KIF19Q2TAC6 998 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 PITPNM3Q9BZ71 974 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 ZSCAN32Q9NX65 697 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 ZFP69BQ9UJL9 534 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 TOM1L1O75674 476 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 IGHDP01880 384 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 PFKFB1P16118 471 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 ATP5JP18859 108 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 SERPINB1P30740 379 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 TPH2Q8IWU9 490 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 ABI1Q8IZP0 508 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 BTBD6Q96KE9 485 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 CAB39Q9Y376 341 aaPredicted RBP7.9□□□□□ -1.14
PTPN3-203ENST00000412145 TMEM191CA6NGB0 347 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 CTIFO43310 598 aaKnown RBP7.9□□□□□ -1.14
PTPN3-203ENST00000412145 CDC27P30260 824 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 HP1BP3Q5SSJ5 553 aaPredicted RBP7.9□□□□□ -1.14
PTPN3-203ENST00000412145 DAB2IPQ5VWQ8 1189 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 DARS2Q6PI48 645 aaKnown RBP7.9□□□□□ -1.14
PTPN3-203ENST00000412145 TRIM72Q6ZMU5 477 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 LARP4BQ92615 738 aaKnown RBP7.9□□□□□ -1.14
PTPN3-203ENST00000412145 FOPNLQ96NB1 174 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 RNF26Q9BY78 433 aaPredicted RBP7.9□□□□□ -1.14
PTPN3-203ENST00000412145 ARHGEF10O15013 1369 aa7.9□□□□□ -1.14
PTPN3-203ENST00000412145 TARSL2A2RTX5 802 aaKnown RBP7.9□□□□□ -1.15
PTPN3-203ENST00000412145 ZNF197O14709 1029 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 ZBED1O96006 694 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 ARL6IP4Q66PJ3 421 aaKnown RBP7.9□□□□□ -1.15
PTPN3-203ENST00000412145 MIS18BP1Q6P0N0 1132 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 ZNF653Q96CK0 615 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 CCDC134Q9H6E4 229 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 DDX56Q9NY93 547 aaKnown RBP7.9□□□□□ -1.15
PTPN3-203ENST00000412145 SLAIN2Q9P270 581 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 TUBGCP4Q9UGJ1 667 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 POC1B-GALNT4F8VUJ3 575 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 PSMD3O43242 534 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 E2F5Q15329 346 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 RRM2BQ7LG56 351 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 PPM1KQ8N3J5 372 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 MAML1Q92585 1016 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 DDX50Q9BQ39 737 aaKnown RBP7.9□□□□□ -1.15
PTPN3-203ENST00000412145 TUBGCP2Q9BSJ2 902 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 PCDHGB4Q9UN71 923 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 AP4S1Q9Y587 144 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 TNPO2O14787 897 aaKnown RBP7.9□□□□□ -1.15
PTPN3-203ENST00000412145 TBC1D4O60343 1298 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 BRD2P25440 801 aaKnown RBP7.9□□□□□ -1.15
PTPN3-203ENST00000412145 C1orf146Q5VVC0 180 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 HDDC2Q7Z4H3 204 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 BBS7Q8IWZ6 715 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 TEKT4Q8WW24 435 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 WWP1Q9H0M0 922 aa7.9□□□□□ -1.15
PTPN3-203ENST00000412145 ABCA5Q8WWZ7 1642 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 RNF103-CHMP3A0A140T963 221 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 HNRNPDLO14979 420 aaKnown RBP7.89□□□□□ -1.15
PTPN3-203ENST00000412145 PRDM1O75626 825 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 RECQLP46063 649 aaPredicted RBP7.89□□□□□ -1.15
PTPN3-203ENST00000412145 CYP2J2P51589 502 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 CSTF3Q12996 717 aaKnown RBP7.89□□□□□ -1.15
PTPN3-203ENST00000412145 CAPRIN2Q6IMN6 1127 aaKnown RBP7.89□□□□□ -1.15
PTPN3-203ENST00000412145 NUDT18Q6ZVK8 323 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 SPATA5Q8NB90 893 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 C3orf20Q8ND61 904 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 PPP1R13BQ96KQ4 1090 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 PRRG3Q9BZD7 231 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 DDX28Q9NUL7 540 aaKnown RBP7.89□□□□□ -1.15
PTPN3-203ENST00000412145 SMG5Q9UPR3 1016 aaKnown RBP7.89□□□□□ -1.15
PTPN3-203ENST00000412145 PCDHB4Q9Y5E5 795 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 STXBP3O00186 592 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 NDUFA5Q16718 116 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 TCP11X2Q5H9J9 407 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 USP19O94966 1318 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 UFL1O94874 794 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 AP3M2P53677 418 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 TNFAIP2Q03169 654 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 TMCO4Q5TGY1 634 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 TTBK2Q6IQ55 1244 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 SLC26A7Q8TE54 656 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 FAM167AQ96KS9 214 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 ZNF556Q9HAH1 456 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 ADAM30Q9UKF2 790 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 B4E1Z4 1266 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 SPAG6O75602 509 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 SOX5P35711 763 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 EHHADHQ08426 723 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 UGP2Q16851 508 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 XKR9Q5GH70 373 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 ZNF544Q6NX49 715 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 TOGARAM2Q6ZUX3 1019 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 IKBIPQ70UQ0 350 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 SMCR8Q8TEV9 937 aaPredicted RBP7.89□□□□□ -1.15
PTPN3-203ENST00000412145 BRD8Q9H0E9 1235 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 ZNF229Q9UJW7 825 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 CLASP1Q7Z460 1538 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 ZNF518AQ6AHZ1 1483 aa7.89□□□□□ -1.15
PTPN3-203ENST00000412145 EDC4Q6P2E9 1401 aaKnown RBP7.89□□□□□ -1.15
PTPN3-203ENST00000412145 BRAFP15056 766 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms