RNA–Protein interactions for RNA: ENST00000411844.1

CLUHP3-202, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 2

Gene CLUHP3, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-202ENST00000411844 EDRF1Q3B7T1 1238 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 ZNF792Q3KQV3 632 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 ZCWPW2Q504Y3 356 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 TCP11X2Q5H9J9 407 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 ANKRD40Q6AI12 368 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 PADI6Q6TGC4 694 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 EPM2AIP1Q7L775 607 aaPredicted RBP12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 APTXQ7Z2E3 356 aaKnown RBP12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 VSTM4Q8IW00 320 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 MSL3Q8N5Y2 521 aaKnown RBP12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 ANKRD13CQ8N6S4 541 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 CCDC43Q96MW1 224 aaKnown RBP12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 DUSP9Q99956 384 aaKnown RBP12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 PORCNQ9H237 461 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 EFCC1Q9HA90 598 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 PARVGQ9HBI0 331 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 SLC5A4Q9NY91 659 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 MAPK8IP1Q9UQF2 711 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 ZKSCAN5Q9Y2L8 839 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 PPME1Q9Y570 386 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 LRRC37A2A6NM11 1700 aa12.9□□□□□ -0.34
CLUHP3-202ENST00000411844 IGSF9BQ9UPX0 1349 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 IGKV6D-21A0A0A0MT36 114 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 NPHP3-ACAD11A0A0J9YXS1 232 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 SLC15A5A6NIM6 579 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 TPM2P07951 284 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 PRKCSHP14314 528 aaPredicted RBP12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 UBA1P22314 1058 aaKnown RBP12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 PMS1P54277 932 aaKnown RBP12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 SREBF2Q12772 1141 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 GRB14Q14449 540 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 WDR78Q5VTH9 848 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 METTL7BQ6UX53 244 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 MAMDC4Q6UXC1 1216 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 SEPT14Q6ZU15 432 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 SFR1Q86XK3 245 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 ZC3H3Q8IXZ2 948 aaKnown RBP12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 SPC24Q8NBT2 197 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 CCDC150Q8NCX0 1101 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 ZNF507Q8TCN5 953 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 DRC1Q96MC2 740 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 CEP63Q96MT8 703 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 NAP1L5Q96NT1 182 aaPredicted RBP12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 SRRTQ9BXP5 876 aaKnown RBP12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 SEMA6BQ9H3T3 888 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 GPBP1L1Q9HC44 474 aaPredicted RBP12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 VTA1Q9NP79 307 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 LARSQ9P2J5 1176 aaKnown RBP12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 KCNG1Q9UIX4 513 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 ZNF236Q9UL36 1845 aa12.89□□□□□ -0.35
CLUHP3-202ENST00000411844 TRIM49BA6NDI0 452 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 ESPNB1AK53 854 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 PDXKO00764 312 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 FARP2O94887 1054 aaPredicted RBP12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 GNA14O95837 355 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 PGK2P07205 417 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 SCP2P22307 547 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 ADORA2AP29274 412 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 ABCD1P33897 745 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 FKBP3Q00688 224 aaKnown RBP12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 SP2Q02086 613 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 KRT31Q15323 416 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 NFIL3Q16649 462 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 UGCGQ16739 394 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 XKR3Q5GH77 459 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 FAM160B1Q5W0V3 765 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 CCDC186Q7Z3E2 898 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 PLEKHH3Q7Z736 793 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 IRF2BP1Q8IU81 584 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 AFAP1L1Q8TED9 768 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 SCFD2Q8WU76 684 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 SCFD1Q8WVM8 642 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 HPS3Q969F9 1004 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 KCTD10Q9H3F6 313 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 ST6GALNAC4Q9H4F1 302 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 C17orf75Q9HAS0 396 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 GABBR1Q9UBS5 961 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 DDX41Q9UJV9 622 aaKnown RBP12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 TRAF3IP3Q9Y228 551 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 MAFBQ9Y5Q3 323 aaPredicted RBP12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 ITIH6Q6UXX5 1313 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
CLUHP3-202ENST00000411844 RBM47A0AV96 593 aaKnown RBP12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 STBD1O95210 358 aa12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 MSNP26038 577 aaKnown RBP12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 COPB1P53618 953 aaKnown RBP12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 RTP1P59025 263 aa12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 RAD51AP2Q09MP3 1159 aa12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 FSTL1Q12841 308 aa12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 MAPK7Q13164 816 aa12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 TTLL4Q14679 1199 aa12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 KNOP1Q1ED39 458 aaKnown RBP12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 XKR9Q5GH70 373 aa12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 SPECC1LQ69YQ0 1117 aa12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 SWSAP1Q6NVH7 229 aa12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 CCDC62Q6P9F0 684 aa12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 CYFIP1Q7L576 1253 aa12.87□□□□□ -0.35
CLUHP3-202ENST00000411844 TMC6Q7Z403 805 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms