RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 PLCG1P19174 1290 aa20.84■□□□□ 0.93
CDC42-204ENST00000411827 CTTNQ14247 550 aaKnown RBP20.84■□□□□ 0.93
CDC42-204ENST00000411827 ZRSR1Q15695 479 aaKnown RBP20.84■□□□□ 0.93
CDC42-204ENST00000411827 TMEM63BQ5T3F8 832 aa20.84■□□□□ 0.93
CDC42-204ENST00000411827 LHX8Q68G74 356 aa20.84■□□□□ 0.93
CDC42-204ENST00000411827 POTEBQ6S5H4 581 aa20.84■□□□□ 0.93
CDC42-204ENST00000411827 BANK1Q8NDB2 785 aa20.84■□□□□ 0.93
CDC42-204ENST00000411827 KLHDC9Q8NEP7 349 aa20.84■□□□□ 0.93
CDC42-204ENST00000411827 BBXQ8WY36 941 aaPredicted RBP20.84■□□□□ 0.93
CDC42-204ENST00000411827 CCDC43Q96MW1 224 aaKnown RBP20.84■□□□□ 0.93
CDC42-204ENST00000411827 RNF208Q9H0X6 261 aa20.84■□□□□ 0.93
CDC42-204ENST00000411827 MOXD2PA6NHM9 499 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 H3BRB1 525 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 CTAGE5O15320 804 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 OATP04181 439 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 YWHABP31946 246 aaKnown RBP20.83■□□□□ 0.93
CDC42-204ENST00000411827 SNW1Q13573 536 aaKnown RBP20.83■□□□□ 0.93
CDC42-204ENST00000411827 E2F4Q16254 413 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 KLHL40Q2TBA0 621 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 SV2BQ7L1I2 683 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 CKAP2LQ8IYA6 745 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 PDILTQ8N807 584 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 ATP8B4Q8TF62 1192 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 PNMA5Q96PV4 448 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 MTG1Q9BT17 334 aaPredicted RBP20.83■□□□□ 0.93
CDC42-204ENST00000411827 NIFKQ9BYG3 293 aaKnown RBP20.83■□□□□ 0.93
CDC42-204ENST00000411827 UNC93B1Q9H1C4 597 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 TNMDQ9H2S6 317 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 GOLPH3LQ9H4A5 285 aa20.83■□□□□ 0.93
CDC42-204ENST00000411827 TUT1Q9H6E5 874 aaKnown RBP20.83■□□□□ 0.93
CDC42-204ENST00000411827 BMP2KQ9NSY1 1161 aaPredicted RBP20.83■□□□□ 0.93
CDC42-204ENST00000411827 POTEFA5A3E0 1075 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 HBP1O60381 514 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 SORBS3O60504 671 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 F2P00734 622 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 GJB1P08034 283 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 PRKCEQ02156 737 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 UTP14CQ5TAP6 766 aaKnown RBP20.82■□□□□ 0.92
CDC42-204ENST00000411827 POTEGQ6S5H5 508 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 KRBA2Q6ZNG9 492 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 CNNM3Q8NE01 707 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 LARP4BQ92615 738 aaKnown RBP20.82■□□□□ 0.92
CDC42-204ENST00000411827 RAD54LQ92698 747 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 DHX58Q96C10 678 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 PCYT2Q99447 389 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 C16orf70Q9BSU1 422 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 TIPINQ9BVW5 301 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 DACT1Q9NYF0 836 aa20.82■□□□□ 0.92
CDC42-204ENST00000411827 NR1I2O75469 434 aa20.81■□□□□ 0.92
CDC42-204ENST00000411827 LIG1P18858 919 aa20.81■□□□□ 0.92
CDC42-204ENST00000411827 PURAQ00577 322 aaKnown RBP20.81■□□□□ 0.92
CDC42-204ENST00000411827 SYT2Q8N9I0 419 aaPredicted RBP20.81■□□□□ 0.92
CDC42-204ENST00000411827 JPH2Q9BR39 696 aaPredicted RBP20.81■□□□□ 0.92
CDC42-204ENST00000411827 PANK2Q9BZ23 570 aa20.81■□□□□ 0.92
CDC42-204ENST00000411827 KBTBD4Q9NVX7 518 aa20.81■□□□□ 0.92
CDC42-204ENST00000411827 OGDHLQ9ULD0 1010 aa20.81■□□□□ 0.92
CDC42-204ENST00000411827 COL1A2P08123 1366 aa20.81■□□□□ 0.92
CDC42-204ENST00000411827 ARHGEF35A5YM69 484 aa20.8■□□□□ 0.92
CDC42-204ENST00000411827 RRN3P2A6NIE6 340 aa20.8■□□□□ 0.92
CDC42-204ENST00000411827 KBTBD13C9JR72 458 aa20.8■□□□□ 0.92
CDC42-204ENST00000411827 ACTN4O43707 911 aaKnown RBP20.8■□□□□ 0.92
CDC42-204ENST00000411827 ZNF862O60290 1169 aa20.8■□□□□ 0.92
CDC42-204ENST00000411827 PGK1P00558 417 aa20.8■□□□□ 0.92
CDC42-204ENST00000411827 LRRC41Q15345 812 aa20.8■□□□□ 0.92
CDC42-204ENST00000411827 NAALADL2Q58DX5 795 aa20.8■□□□□ 0.92
CDC42-204ENST00000411827 ZNF484Q5JVG2 852 aa20.8■□□□□ 0.92
CDC42-204ENST00000411827 CCSAPQ6IQ19 270 aaPredicted RBP20.8■□□□□ 0.92
CDC42-204ENST00000411827 A0A087X0B3 334 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 DNM1LO00429 736 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 GAS2O43903 313 aaKnown RBP20.79■□□□□ 0.92
CDC42-204ENST00000411827 MYL3P08590 195 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 PLA2G4BP0C869 781 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 GNAT1P11488 350 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 RFC5P40937 340 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 ECM1Q16610 540 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 UGCGQ16739 394 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 LONRF3Q496Y0 759 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 CNNM4Q6P4Q7 775 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 ANKLE1Q8NAG6 615 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 GPT2Q8TD30 523 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 LENG1Q96BZ8 264 aaPredicted RBP20.79■□□□□ 0.92
CDC42-204ENST00000411827 DEFB118Q96PH6 123 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 TMEM106CQ9BVX2 250 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 GTPBP4Q9BZE4 634 aaKnown RBP20.79■□□□□ 0.92
CDC42-204ENST00000411827 MCOLN1Q9GZU1 580 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 BLOC1S4Q9NUP1 217 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 KCNG1Q9UIX4 513 aa20.79■□□□□ 0.92
CDC42-204ENST00000411827 LOXHD1Q8IVV2 1947 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 HAS3O00219 553 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 DGAT1O75907 488 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 SGPL1O95470 568 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 RARRES1P49788 294 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 PLCB4Q15147 1175 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 KCNA10Q16322 511 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 TPRNQ4KMQ1 711 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 ANO5Q75V66 913 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 CRISPLD2Q9H0B8 497 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 BHMT2Q9H2M3 363 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 CYP26B1Q9NR63 512 aa20.78■□□□□ 0.92
CDC42-204ENST00000411827 WRAP73Q9P2S5 460 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms