RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 GNAT1P11488 350 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 JAK3P52333 1124 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 TMEM62Q0P6H9 643 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 GPNMBQ14956 572 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 OTOP2Q7RTS6 562 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 ATP8B4Q8TF62 1192 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 DNAJB3Q8WWF6 145 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 TUBE1Q9UJT0 475 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 KAT6AQ92794 2004 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 PPIGQ13427 754 aaKnown RBP eCLIP13.48□□□□□ -0.25
NEDD1-202ENST00000411739 LRRC8DQ7L1W4 858 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 MTMR9Q96QG7 549 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
NEDD1-202ENST00000411739 WRAP73Q9P2S5 460 aaPredicted RBP13.48□□□□□ -0.25
NEDD1-202ENST00000411739 PCDHA12Q9UN75 941 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 ZBTB42B2RXF5 422 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 SOX1O00570 391 aaPredicted RBP13.48□□□□□ -0.25
NEDD1-202ENST00000411739 SELPP16109 830 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 SFNP31947 248 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 PRKCEQ02156 737 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 CYP4A11Q02928 519 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 SPIRE1Q08AE8 756 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 PPP2R5CQ13362 524 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 MBTPS1Q14703 1052 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 TMEM240Q5SV17 173 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 TRAF7Q6Q0C0 670 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 FTOQ9C0B1 505 aaKnown RBP eCLIP13.48□□□□□ -0.25
NEDD1-202ENST00000411739 IL23AQ9NPF7 189 aa13.48□□□□□ -0.25
NEDD1-202ENST00000411739 NOL7Q9UMY1 257 aaKnown RBP13.48□□□□□ -0.25
NEDD1-202ENST00000411739 IGSF9BQ9UPX0 1349 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 POTEMA6NI47 508 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 ZBTB39O15060 712 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 TBX3O15119 743 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 HBP1O60381 514 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 SYT1P21579 422 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 KLRC1P26715 233 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 CTTNQ14247 550 aaKnown RBP13.47□□□□□ -0.25
NEDD1-202ENST00000411739 FOXD4L5Q5VV16 416 aaPredicted RBP13.47□□□□□ -0.25
NEDD1-202ENST00000411739 SLFN12Q8IYM2 578 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 CAGE1Q8TC20 777 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 FOXD4L4Q8WXT5 416 aaPredicted RBP13.47□□□□□ -0.25
NEDD1-202ENST00000411739 DYDC2Q96IM9 177 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 PPP1R16BQ96T49 567 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 SZT2Q5T011 3432 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 NBNO60934 754 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 TECP42680 631 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 TCTN1Q2MV58 587 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 FAM173BQ6P4H8 233 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 MTHFD1LQ6UB35 978 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 LRCH3Q96II8 777 aa13.47□□□□□ -0.25
NEDD1-202ENST00000411739 RNPC3Q96LT9 517 aaKnown RBP13.47□□□□□ -0.25
NEDD1-202ENST00000411739 CXXC1Q9P0U4 656 aaPredicted RBP13.47□□□□□ -0.25
NEDD1-202ENST00000411739 RRN3P2A6NIE6 340 aa13.46□□□□□ -0.25
NEDD1-202ENST00000411739 DDX11L8A8MPP1 907 aa13.46□□□□□ -0.25
NEDD1-202ENST00000411739 RSPH10B2B2RC85 870 aa13.46□□□□□ -0.25
NEDD1-202ENST00000411739 OATP04181 439 aa13.46□□□□□ -0.25
NEDD1-202ENST00000411739 HSP90AA1P07900 732 aaKnown RBP13.46□□□□□ -0.25
NEDD1-202ENST00000411739 RSPH10BP0C881 870 aa13.46□□□□□ -0.25
NEDD1-202ENST00000411739 SLC26A2P50443 739 aa13.46□□□□□ -0.25
NEDD1-202ENST00000411739 PLA2G4FQ68DD2 849 aa13.46□□□□□ -0.25
NEDD1-202ENST00000411739 CCDC155Q8N6L0 562 aa13.46□□□□□ -0.25
NEDD1-202ENST00000411739 C4orf32Q8N8J7 132 aa13.46□□□□□ -0.25
NEDD1-202ENST00000411739 TET1Q8NFU7 2136 aa13.46□□□□□ -0.25
NEDD1-202ENST00000411739 INTS4Q96HW7 963 aaKnown RBP13.46□□□□□ -0.25
NEDD1-202ENST00000411739 SEPT9Q9UHD8 586 aaPredicted RBP13.46□□□□□ -0.25
NEDD1-202ENST00000411739 MYH9P35579 1960 aaKnown RBP13.46□□□□□ -0.25
NEDD1-202ENST00000411739 MBLAC1A4D2B0 266 aaPredicted RBP13.46□□□□□ -0.26
NEDD1-202ENST00000411739 STBD1O95210 358 aa13.46□□□□□ -0.26
NEDD1-202ENST00000411739 FGBP02675 491 aa13.46□□□□□ -0.26
NEDD1-202ENST00000411739 PTGDRQ13258 359 aa13.46□□□□□ -0.26
NEDD1-202ENST00000411739 MTERF2Q49AM1 385 aa13.46□□□□□ -0.26
NEDD1-202ENST00000411739 FAM109BQ6ICB4 259 aaPredicted RBP13.46□□□□□ -0.26
NEDD1-202ENST00000411739 TPH2Q8IWU9 490 aa13.46□□□□□ -0.26
NEDD1-202ENST00000411739 METTL13Q8N6R0 699 aa13.46□□□□□ -0.26
NEDD1-202ENST00000411739 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.26
NEDD1-202ENST00000411739 BBXQ8WY36 941 aaPredicted RBP13.46□□□□□ -0.26
NEDD1-202ENST00000411739 ZNF668Q96K58 619 aaPredicted RBP13.46□□□□□ -0.26
NEDD1-202ENST00000411739 GRXCR1A8MXD5 290 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 CHRNA1P02708 482 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 OR52Z1P0C646 297 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 EPHA7Q15375 998 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 LRRC71Q8N4P6 559 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 EIF2AK1Q9BQI3 630 aaKnown RBP13.45□□□□□ -0.26
NEDD1-202ENST00000411739 NRBP2Q9NSY0 501 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 BMP2KQ9NSY1 1161 aaPredicted RBP13.45□□□□□ -0.26
NEDD1-202ENST00000411739 GINS2Q9Y248 185 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 ZBBXA8MT70 800 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 TRAPPC10P48553 1259 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 NPEPPSP55786 919 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 PSMC5P62195 406 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 ZNF484Q5JVG2 852 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 RPUSD2Q8IZ73 545 aaKnown RBP13.45□□□□□ -0.26
NEDD1-202ENST00000411739 RDM1Q8NG50 284 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 LXNQ9BS40 222 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 SUGCTQ9HAC7 445 aa13.45□□□□□ -0.26
NEDD1-202ENST00000411739 WDR81Q562E7 1941 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 SLITRK3O94933 977 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 C22orf31O95567 290 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 QARSP47897 775 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms