RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.41■□□□□ 0.54
NOD1-202ENST00000411552 HBP1O60381 514 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 NEMFO60524 1076 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 PFKMP08237 780 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 ATP2B1P20020 1258 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 U2AF2P26368 475 aaKnown RBP eCLIP18.4■□□□□ 0.54
NOD1-202ENST00000411552 PPP2R5CQ13362 524 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 CUL4AQ13619 759 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 MBTPS1Q14703 1052 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 UGCGQ16739 394 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 RASIP1Q5U651 963 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 TAF2Q6P1X5 1199 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 OTOP2Q7RTS6 562 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 TRMT1LQ7Z2T5 733 aaKnown RBP18.4■□□□□ 0.54
NOD1-202ENST00000411552 HERVK_113Q902F9 699 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 LRCH3Q96II8 777 aa18.4■□□□□ 0.54
NOD1-202ENST00000411552 RSPH10B2B2RC85 870 aa18.39■□□□□ 0.53
NOD1-202ENST00000411552 ZBTB42B2RXF5 422 aa18.39■□□□□ 0.53
NOD1-202ENST00000411552 RBAK-RBAKDNI3L0D1 243 aa18.39■□□□□ 0.53
NOD1-202ENST00000411552 EML1O00423 815 aa18.39■□□□□ 0.53
NOD1-202ENST00000411552 ZNF862O60290 1169 aa18.39■□□□□ 0.53
NOD1-202ENST00000411552 MARCH6O60337 910 aa18.39■□□□□ 0.53
NOD1-202ENST00000411552 NBNO60934 754 aa18.39■□□□□ 0.53
NOD1-202ENST00000411552 CAND2O75155 1236 aa18.39■□□□□ 0.53
NOD1-202ENST00000411552 PARNO95453 639 aaKnown RBP18.39■□□□□ 0.53
NOD1-202ENST00000411552 CTSHP09668 335 aa18.39■□□□□ 0.53
NOD1-202ENST00000411552 RSPH10BP0C881 870 aa18.39■□□□□ 0.53
NOD1-202ENST00000411552 SLFN12Q8IYM2 578 aa18.39■□□□□ 0.53
NOD1-202ENST00000411552 BBXQ8WY36 941 aaPredicted RBP18.39■□□□□ 0.53
NOD1-202ENST00000411552 FTOQ9C0B1 505 aaKnown RBP eCLIP18.39■□□□□ 0.53
NOD1-202ENST00000411552 CXXC1Q9P0U4 656 aaPredicted RBP18.39■□□□□ 0.53
NOD1-202ENST00000411552 EVPLQ92817 2033 aa18.39■□□□□ 0.53
NOD1-202ENST00000411552 BAG4O95429 457 aaKnown RBP18.38■□□□□ 0.53
NOD1-202ENST00000411552 CXCL10P02778 98 aa18.38■□□□□ 0.53
NOD1-202ENST00000411552 MCM7P33993 719 aa18.38■□□□□ 0.53
NOD1-202ENST00000411552 PRKCEQ02156 737 aa18.38■□□□□ 0.53
NOD1-202ENST00000411552 SPIRE1Q08AE8 756 aa18.38■□□□□ 0.53
NOD1-202ENST00000411552 CALCRLQ16602 461 aa18.38■□□□□ 0.53
NOD1-202ENST00000411552 ZNF484Q5JVG2 852 aa18.38■□□□□ 0.53
NOD1-202ENST00000411552 RPAINQ86UA6 219 aa18.38■□□□□ 0.53
NOD1-202ENST00000411552 DNAJB3Q8WWF6 145 aa18.38■□□□□ 0.53
NOD1-202ENST00000411552 FAM167AQ96KS9 214 aa18.38■□□□□ 0.53
NOD1-202ENST00000411552 COL1A2P08123 1366 aa18.38■□□□□ 0.53
NOD1-202ENST00000411552 OATP04181 439 aa18.37■□□□□ 0.53
NOD1-202ENST00000411552 KLRC1P26715 233 aa18.37■□□□□ 0.53
NOD1-202ENST00000411552 MCTP1Q6DN14 999 aa18.37■□□□□ 0.53
NOD1-202ENST00000411552 MTHFD1LQ6UB35 978 aa18.37■□□□□ 0.53
NOD1-202ENST00000411552 BANK1Q8NDB2 785 aa18.37■□□□□ 0.53
NOD1-202ENST00000411552 MTMR9Q96QG7 549 aa18.37■□□□□ 0.53
NOD1-202ENST00000411552 FAM49AQ9H0Q0 323 aaPredicted RBP18.37■□□□□ 0.53
NOD1-202ENST00000411552 TMEM60Q9H2L4 133 aa18.37■□□□□ 0.53
NOD1-202ENST00000411552 PCDHA2Q9Y5H9 948 aa18.37■□□□□ 0.53
NOD1-202ENST00000411552 H3BQV1 296 aa18.36■□□□□ 0.53
NOD1-202ENST00000411552 CHRNA1P02708 482 aa18.36■□□□□ 0.53
NOD1-202ENST00000411552 ACTN1P12814 892 aa18.36■□□□□ 0.53
NOD1-202ENST00000411552 SIP14410 1827 aa18.36■□□□□ 0.53
NOD1-202ENST00000411552 TRAPPC10P48553 1259 aa18.36■□□□□ 0.53
NOD1-202ENST00000411552 ZNF174Q15697 407 aa18.36■□□□□ 0.53
NOD1-202ENST00000411552 FAM26DQ5JW98 314 aa18.36■□□□□ 0.53
NOD1-202ENST00000411552 TTC38Q5R3I4 469 aa18.36■□□□□ 0.53
NOD1-202ENST00000411552 FAM109BQ6ICB4 259 aaPredicted RBP18.36■□□□□ 0.53
NOD1-202ENST00000411552 RSPH3Q86UC2 560 aa18.36■□□□□ 0.53
NOD1-202ENST00000411552 OSBPL7Q9BZF2 842 aa18.36■□□□□ 0.53
NOD1-202ENST00000411552 MTIF3Q9H2K0 278 aaKnown RBP18.36■□□□□ 0.53
NOD1-202ENST00000411552 PCDHA12Q9UN75 941 aa18.36■□□□□ 0.53
NOD1-202ENST00000411552 ZBBXA8MT70 800 aa18.35■□□□□ 0.53
NOD1-202ENST00000411552 K7ELQ4 463 aaPredicted RBP18.35■□□□□ 0.53
NOD1-202ENST00000411552 STBD1O95210 358 aa18.35■□□□□ 0.53
NOD1-202ENST00000411552 C22orf31O95567 290 aa18.35■□□□□ 0.53
NOD1-202ENST00000411552 TXKP42681 527 aa18.35■□□□□ 0.53
NOD1-202ENST00000411552 TOB1P50616 345 aaPredicted RBP18.35■□□□□ 0.53
NOD1-202ENST00000411552 SMAD3P84022 425 aaKnown RBP18.35■□□□□ 0.53
NOD1-202ENST00000411552 NBR1Q14596 966 aa18.35■□□□□ 0.53
NOD1-202ENST00000411552 TCTN1Q2MV58 587 aa18.35■□□□□ 0.53
NOD1-202ENST00000411552 LARP1BQ659C4 914 aaKnown RBP18.35■□□□□ 0.53
NOD1-202ENST00000411552 NCAPH2Q6IBW4 605 aa18.35■□□□□ 0.53
NOD1-202ENST00000411552 TTC12Q9H892 705 aaPredicted RBP18.35■□□□□ 0.53
NOD1-202ENST00000411552 NRBP2Q9NSY0 501 aa18.35■□□□□ 0.53
NOD1-202ENST00000411552 NOL7Q9UMY1 257 aaKnown RBP18.35■□□□□ 0.53
NOD1-202ENST00000411552 CEP131Q9UPN4 1083 aa18.35■□□□□ 0.53
NOD1-202ENST00000411552 LOXHD1Q8IVV2 1947 aa18.34■□□□□ 0.53
NOD1-202ENST00000411552 SMIM35A0A1B0GVV1 85 aa18.34■□□□□ 0.53
NOD1-202ENST00000411552 RPLP2P05387 115 aaKnown RBP18.34■□□□□ 0.53
NOD1-202ENST00000411552 PSMC5P62195 406 aa18.34■□□□□ 0.53
NOD1-202ENST00000411552 MRPS6P82932 125 aaKnown RBP18.34■□□□□ 0.53
NOD1-202ENST00000411552 MGAT3Q09327 533 aa18.34■□□□□ 0.53
NOD1-202ENST00000411552 ORC2Q13416 577 aaPredicted RBP18.34■□□□□ 0.53
NOD1-202ENST00000411552 EPHA7Q15375 998 aa18.34■□□□□ 0.53
NOD1-202ENST00000411552 CNKSR3Q6P9H4 555 aa18.34■□□□□ 0.53
NOD1-202ENST00000411552 SNX21Q969T3 373 aa18.34■□□□□ 0.53
NOD1-202ENST00000411552 SLC4A7Q9Y6M7 1214 aa18.34■□□□□ 0.53
NOD1-202ENST00000411552 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.33■□□□□ 0.52
NOD1-202ENST00000411552 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.33■□□□□ 0.52
NOD1-202ENST00000411552 TMEM150BA6NC51 233 aa18.33■□□□□ 0.52
NOD1-202ENST00000411552 GRXCR1A8MXD5 290 aa18.33■□□□□ 0.52
NOD1-202ENST00000411552 BAIAP3O94812 1187 aa18.33■□□□□ 0.52
NOD1-202ENST00000411552 P4HBP07237 508 aaKnown RBP18.33■□□□□ 0.52
NOD1-202ENST00000411552 QARSP47897 775 aaKnown RBP18.33■□□□□ 0.52
NOD1-202ENST00000411552 TMEM62Q0P6H9 643 aa18.33■□□□□ 0.52
NOD1-202ENST00000411552 PLEKHG4Q58EX7 1191 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms