RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 HBP1O60381 514 aa35.13■■■■□ 3.21
TRAF3IP1-203ENST00000409739 PPP2R5CQ13362 524 aa35.13■■■■□ 3.21
TRAF3IP1-203ENST00000409739 GNL2Q13823 731 aaKnown RBP35.13■■■■□ 3.21
TRAF3IP1-203ENST00000409739 GPNMBQ14956 572 aa35.13■■■■□ 3.21
TRAF3IP1-203ENST00000409739 UGCGQ16739 394 aa35.13■■■■□ 3.21
TRAF3IP1-203ENST00000409739 PTPRSQ13332 1948 aa35.12■■■■□ 3.21
TRAF3IP1-203ENST00000409739 MICAL3Q7RTP6 2002 aa35.12■■■■□ 3.21
TRAF3IP1-203ENST00000409739 CAND2O75155 1236 aa35.12■■■■□ 3.21
TRAF3IP1-203ENST00000409739 RASIP1Q5U651 963 aa35.12■■■■□ 3.21
TRAF3IP1-203ENST00000409739 TAF2Q6P1X5 1199 aa35.12■■■■□ 3.21
TRAF3IP1-203ENST00000409739 CKAP2LQ8IYA6 745 aa35.12■■■■□ 3.21
TRAF3IP1-203ENST00000409739 ZBTB10Q96DT7 871 aa35.12■■■■□ 3.21
TRAF3IP1-203ENST00000409739 COL1A2P08123 1366 aa35.12■■■■□ 3.21
TRAF3IP1-203ENST00000409739 NEMFO60524 1076 aa35.11■■■■□ 3.21
TRAF3IP1-203ENST00000409739 PARNO95453 639 aaKnown RBP35.11■■■■□ 3.21
TRAF3IP1-203ENST00000409739 FGBP02675 491 aa35.11■■■■□ 3.21
TRAF3IP1-203ENST00000409739 U2AF2P26368 475 aaKnown RBP eCLIP35.11■■■■□ 3.21
TRAF3IP1-203ENST00000409739 MBTPS1Q14703 1052 aa35.11■■■■□ 3.21
TRAF3IP1-203ENST00000409739 SLFN12Q8IYM2 578 aa35.11■■■■□ 3.21
TRAF3IP1-203ENST00000409739 BBXQ8WY36 941 aaPredicted RBP35.11■■■■□ 3.21
TRAF3IP1-203ENST00000409739 HERVK_113Q902F9 699 aa35.11■■■■□ 3.21
TRAF3IP1-203ENST00000409739 LRCH3Q96II8 777 aa35.11■■■■□ 3.21
TRAF3IP1-203ENST00000409739 EML1O00423 815 aa35.1■■■■□ 3.21
TRAF3IP1-203ENST00000409739 ZNF862O60290 1169 aa35.1■■■■□ 3.21
TRAF3IP1-203ENST00000409739 MARCH6O60337 910 aa35.1■■■■□ 3.21
TRAF3IP1-203ENST00000409739 NBNO60934 754 aa35.1■■■■□ 3.21
TRAF3IP1-203ENST00000409739 ATP2B1P20020 1258 aa35.1■■■■□ 3.21
TRAF3IP1-203ENST00000409739 OTOP2Q7RTS6 562 aa35.1■■■■□ 3.21
TRAF3IP1-203ENST00000409739 ARID2Q68CP9 1835 aa35.09■■■■□ 3.21
TRAF3IP1-203ENST00000409739 ZBTB42B2RXF5 422 aa35.09■■■■□ 3.21
TRAF3IP1-203ENST00000409739 BAG4O95429 457 aaKnown RBP35.09■■■■□ 3.21
TRAF3IP1-203ENST00000409739 CTSHP09668 335 aa35.09■■■■□ 3.21
TRAF3IP1-203ENST00000409739 PRKCEQ02156 737 aa35.09■■■■□ 3.21
TRAF3IP1-203ENST00000409739 CALCRLQ16602 461 aa35.09■■■■□ 3.21
TRAF3IP1-203ENST00000409739 RPAINQ86UA6 219 aa35.09■■■■□ 3.21
TRAF3IP1-203ENST00000409739 FAM167AQ96KS9 214 aa35.09■■■■□ 3.21
TRAF3IP1-203ENST00000409739 RSPH10B2B2RC85 870 aa35.08■■■■□ 3.21
TRAF3IP1-203ENST00000409739 RSPH10BP0C881 870 aa35.08■■■■□ 3.21
TRAF3IP1-203ENST00000409739 MCM7P33993 719 aa35.08■■■■□ 3.21
TRAF3IP1-203ENST00000409739 SPIRE1Q08AE8 756 aa35.08■■■■□ 3.21
TRAF3IP1-203ENST00000409739 ZNF484Q5JVG2 852 aa35.08■■■■□ 3.21
TRAF3IP1-203ENST00000409739 TRMT1LQ7Z2T5 733 aaKnown RBP35.08■■■■□ 3.21
TRAF3IP1-203ENST00000409739 CXXC1Q9P0U4 656 aaPredicted RBP35.08■■■■□ 3.21
TRAF3IP1-203ENST00000409739 RBAK-RBAKDNI3L0D1 243 aa35.07■■■■□ 3.2
TRAF3IP1-203ENST00000409739 CXCL10P02778 98 aa35.07■■■■□ 3.2
TRAF3IP1-203ENST00000409739 OATP04181 439 aa35.07■■■■□ 3.2
TRAF3IP1-203ENST00000409739 MTHFD1LQ6UB35 978 aa35.07■■■■□ 3.2
TRAF3IP1-203ENST00000409739 DNAJB3Q8WWF6 145 aa35.07■■■■□ 3.2
TRAF3IP1-203ENST00000409739 FTOQ9C0B1 505 aaKnown RBP eCLIP35.07■■■■□ 3.2
TRAF3IP1-203ENST00000409739 TMEM60Q9H2L4 133 aa35.07■■■■□ 3.2
TRAF3IP1-203ENST00000409739 PCDHA2Q9Y5H9 948 aa35.07■■■■□ 3.2
TRAF3IP1-203ENST00000409739 K7ELQ4 463 aaPredicted RBP35.06■■■■□ 3.2
TRAF3IP1-203ENST00000409739 MTMR9Q96QG7 549 aa35.06■■■■□ 3.2
TRAF3IP1-203ENST00000409739 MTIF3Q9H2K0 278 aaKnown RBP35.06■■■■□ 3.2
TRAF3IP1-203ENST00000409739 H3BQV1 296 aa35.05■■■■□ 3.2
TRAF3IP1-203ENST00000409739 TRAPPC10P48553 1259 aa35.05■■■■□ 3.2
TRAF3IP1-203ENST00000409739 FAM26DQ5JW98 314 aa35.05■■■■□ 3.2
TRAF3IP1-203ENST00000409739 TTC38Q5R3I4 469 aa35.05■■■■□ 3.2
TRAF3IP1-203ENST00000409739 BANK1Q8NDB2 785 aa35.05■■■■□ 3.2
TRAF3IP1-203ENST00000409739 FAM49AQ9H0Q0 323 aaPredicted RBP35.05■■■■□ 3.2
TRAF3IP1-203ENST00000409739 NOL7Q9UMY1 257 aaKnown RBP35.05■■■■□ 3.2
TRAF3IP1-203ENST00000409739 ACTN1P12814 892 aa35.04■■■■□ 3.2
TRAF3IP1-203ENST00000409739 KLRC1P26715 233 aa35.04■■■■□ 3.2
TRAF3IP1-203ENST00000409739 ORC2Q13416 577 aaPredicted RBP35.04■■■■□ 3.2
TRAF3IP1-203ENST00000409739 MCTP1Q6DN14 999 aa35.04■■■■□ 3.2
TRAF3IP1-203ENST00000409739 NCAPH2Q6IBW4 605 aa35.04■■■■□ 3.2
TRAF3IP1-203ENST00000409739 RSPH3Q86UC2 560 aa35.04■■■■□ 3.2
TRAF3IP1-203ENST00000409739 SNX21Q969T3 373 aa35.04■■■■□ 3.2
TRAF3IP1-203ENST00000409739 MGAT3Q09327 533 aa35.03■■■■□ 3.2
TRAF3IP1-203ENST00000409739 ZNF174Q15697 407 aa35.03■■■■□ 3.2
TRAF3IP1-203ENST00000409739 LARP1BQ659C4 914 aaKnown RBP35.03■■■■□ 3.2
TRAF3IP1-203ENST00000409739 PCDHA12Q9UN75 941 aa35.03■■■■□ 3.2
TRAF3IP1-203ENST00000409739 CEP131Q9UPN4 1083 aa35.03■■■■□ 3.2
TRAF3IP1-203ENST00000409739 SMIM35A0A1B0GVV1 85 aa35.02■■■■□ 3.2
TRAF3IP1-203ENST00000409739 C22orf31O95567 290 aa35.02■■■■□ 3.2
TRAF3IP1-203ENST00000409739 CHRNA1P02708 482 aa35.02■■■■□ 3.2
TRAF3IP1-203ENST00000409739 RPLP2P05387 115 aaKnown RBP35.02■■■■□ 3.2
TRAF3IP1-203ENST00000409739 NBR1Q14596 966 aa35.02■■■■□ 3.2
TRAF3IP1-203ENST00000409739 FAM109BQ6ICB4 259 aaPredicted RBP35.02■■■■□ 3.2
TRAF3IP1-203ENST00000409739 CNKSR3Q6P9H4 555 aa35.02■■■■□ 3.2
TRAF3IP1-203ENST00000409739 OSBPL7Q9BZF2 842 aa35.02■■■■□ 3.2
TRAF3IP1-203ENST00000409739 TTC12Q9H892 705 aaPredicted RBP35.02■■■■□ 3.2
TRAF3IP1-203ENST00000409739 NRBP2Q9NSY0 501 aa35.02■■■■□ 3.2
TRAF3IP1-203ENST00000409739 ZBBXA8MT70 800 aa35.01■■■■□ 3.2
TRAF3IP1-203ENST00000409739 STBD1O95210 358 aa35.01■■■■□ 3.2
TRAF3IP1-203ENST00000409739 TXKP42681 527 aa35.01■■■■□ 3.2
TRAF3IP1-203ENST00000409739 TOB1P50616 345 aaPredicted RBP35.01■■■■□ 3.2
TRAF3IP1-203ENST00000409739 PSMC5P62195 406 aa35.01■■■■□ 3.2
TRAF3IP1-203ENST00000409739 SMAD3P84022 425 aaKnown RBP35.01■■■■□ 3.2
TRAF3IP1-203ENST00000409739 EPHA7Q15375 998 aa35.01■■■■□ 3.2
TRAF3IP1-203ENST00000409739 TCTN1Q2MV58 587 aa35.01■■■■□ 3.2
TRAF3IP1-203ENST00000409739 MRPS6P82932 125 aaKnown RBP35■■■■□ 3.19
TRAF3IP1-203ENST00000409739 INTS4Q96HW7 963 aaKnown RBP35■■■■□ 3.19
TRAF3IP1-203ENST00000409739 SEPT9Q9UHD8 586 aaPredicted RBP35■■■■□ 3.19
TRAF3IP1-203ENST00000409739 BAIAP3O94812 1187 aa34.99■■■■□ 3.19
TRAF3IP1-203ENST00000409739 P4HBP07237 508 aaKnown RBP34.99■■■■□ 3.19
TRAF3IP1-203ENST00000409739 QARSP47897 775 aaKnown RBP34.99■■■■□ 3.19
TRAF3IP1-203ENST00000409739 XKR3Q5GH77 459 aa34.99■■■■□ 3.19
TRAF3IP1-203ENST00000409739 WRAP73Q9P2S5 460 aaPredicted RBP34.99■■■■□ 3.19
TRAF3IP1-203ENST00000409739 CDY2AQ9Y6F7 541 aa34.99■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms