RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TBC1D9BQ66K14 1250 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 UNC5CLQ8IV45 518 aa9.05□□□□□ -0.96
SCN9A-203ENST00000409672 CLDN3O15551 220 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 EPB42P16452 691 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 RFX3P48380 749 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 TSNAXIP1Q2TAA8 658 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 ASPRV1Q53RT3 343 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 ZBTB40Q9NUA8 1239 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 LRRD1A4D1F6 860 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 CELF2O95319 508 aaKnown RBP9.04□□□□□ -0.96
SCN9A-203ENST00000409672 IL13P35225 146 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 MSH2P43246 934 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 C2orf54Q08AI8 447 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 TAF1CQ15572 869 aaPredicted RBP9.04□□□□□ -0.96
SCN9A-203ENST00000409672 ARHGAP18Q8N392 663 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 RMDN1Q96DB5 314 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 FAM213AQ9BRX8 229 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 ANTXR1Q9H6X2 564 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 GTSE1Q9NYZ3 720 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 NPM3O75607 178 aaKnown RBP9.04□□□□□ -0.96
SCN9A-203ENST00000409672 RPSAP08865 295 aaKnown RBP9.04□□□□□ -0.96
SCN9A-203ENST00000409672 SLC7A5Q01650 507 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 GINM1Q9NU53 330 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 LRRC74AQ0VAA2 488 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 STXBP2Q15833 593 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 PODNQ7Z5L7 613 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 CCDC84Q86UT8 332 aaPredicted RBP9.04□□□□□ -0.96
SCN9A-203ENST00000409672 SMAP1Q8IYB5 467 aaPredicted RBP9.04□□□□□ -0.96
SCN9A-203ENST00000409672 HS6ST3Q8IZP7 471 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 ADCY9O60503 1353 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 PYGLP06737 847 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 TMTC1Q8IUR5 882 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 SCYL3Q8IZE3 742 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 JPH2Q9BR39 696 aaPredicted RBP9.04□□□□□ -0.96
SCN9A-203ENST00000409672 PIN4Q9Y237 131 aaKnown RBP9.04□□□□□ -0.96
SCN9A-203ENST00000409672 CTTNBP2Q8WZ74 1663 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 COBLL1Q53SF7 1204 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 AP1M1Q9BXS5 423 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 ENTPD7Q9NQZ7 604 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 TYW1Q9NV66 732 aaKnown RBP9.04□□□□□ -0.96
SCN9A-203ENST00000409672 CCDC85CA6NKD9 419 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 CDK8P49336 464 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 LARP4BQ92615 738 aaKnown RBP9.04□□□□□ -0.96
SCN9A-203ENST00000409672 PDE8BO95263 885 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 FTCDO95954 541 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 ZBED1O96006 694 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 CYP2D6P10635 497 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 OR1G1P47890 313 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 FBXW10Q5XX13 1052 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 KLC3Q6P597 504 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 PCSK1NQ9UHG2 260 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 ATP8A1Q9Y2Q0 1164 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 PCDHB7Q9Y5E2 793 aa9.04□□□□□ -0.96
SCN9A-203ENST00000409672 GTPBP10A4D1E9 387 aaKnown RBP9.03□□□□□ -0.96
SCN9A-203ENST00000409672 PSMC1P62191 440 aaKnown RBP9.03□□□□□ -0.96
SCN9A-203ENST00000409672 ULK4Q96C45 1275 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 CHAMP1Q96JM3 812 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 FAM217BQ9NTX9 383 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-203ENST00000409672 PCDHA4Q9UN74 947 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 SEMA3EO15041 775 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 GSPT1P15170 499 aaKnown RBP9.03□□□□□ -0.96
SCN9A-203ENST00000409672 UBE3AQ05086 875 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 VEPH1Q14D04 833 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 ERICH1Q86X53 443 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 USP28Q96RU2 1077 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 HEMGNQ9BXL5 484 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 ARIH2O95376 493 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 AFPP02771 609 aaKnown RBP9.03□□□□□ -0.96
SCN9A-203ENST00000409672 MXD3Q9BW11 206 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 FANCLQ9NW38 375 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 KLHL14Q9P2G3 628 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 ZNF699Q32M78 642 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 KANSL2Q9H9L4 492 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 EPS15L1Q9UBC2 864 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 ZBTB12Q9Y330 459 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-203ENST00000409672 MAP3K13O43283 966 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 NLRP11P59045 1033 aaKnown RBP9.03□□□□□ -0.96
SCN9A-203ENST00000409672 LRRC23Q53EV4 343 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-203ENST00000409672 KIF12Q96FN5 646 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 CEP19Q96LK0 163 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 MUC3BQ9H195 1237 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 PARVGQ9HBI0 331 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 KIF17Q9P2E2 1029 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 HDLBPQ00341 1268 aaKnown RBP9.03□□□□□ -0.96
SCN9A-203ENST00000409672 GBP5Q96PP8 586 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 CYTH2Q99418 400 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 ZNF75DP51815 510 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 RPAP3Q9H6T3 665 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-203ENST00000409672 SPON1Q9HCB6 807 aa9.03□□□□□ -0.96
SCN9A-203ENST00000409672 TTC7AQ9ULT0 858 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-203ENST00000409672 GPC3P51654 580 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 PLTPP55058 493 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 NR5A1Q13285 461 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 TMTC3Q6ZXV5 915 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.02□□□□□ -0.96
SCN9A-203ENST00000409672 NMT2O60551 498 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 BBOX1O75936 387 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 ALDH1A1P00352 501 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 LTKP29376 864 aa9.02□□□□□ -0.96
SCN9A-203ENST00000409672 SCRN1Q12765 414 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms