RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 CCDC85CA6NKD9 419 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 STBD1O95210 358 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 OATP04181 439 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 TXLNAP40222 546 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 PSMC6P62333 389 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 XKR3Q5GH77 459 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 SPECC1Q5M775 1068 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 POTEBQ6S5H4 581 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 SHC4Q6S5L8 630 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 NECAB2Q7Z6G3 386 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 UBE2Q1Q7Z7E8 422 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 TPH2Q8IWU9 490 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 CKAP2LQ8IYA6 745 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 KCTD17Q8N5Z5 321 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 SLC43A3Q8NBI5 491 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 TMEM87AQ8NBN3 555 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 BBXQ8WY36 941 aaPredicted RBP18.61■□□□□ 0.57
SUMO1-208ENST00000409627 PAWRQ96IZ0 340 aaKnown RBP18.61■□□□□ 0.57
SUMO1-208ENST00000409627 EPSTI1Q96J88 318 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 RNPEPQ9H4A4 650 aa18.61■□□□□ 0.57
SUMO1-208ENST00000409627 GRIN2DO15399 1336 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 HBP1O60381 514 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 SOX10P56693 466 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 PTPN11Q06124 597 aaPredicted RBP18.6■□□□□ 0.57
SUMO1-208ENST00000409627 ITGA7Q13683 1181 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 ECM1Q16610 540 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 NBPF20Q3BBV1 942 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 NFRKBQ6P4R8 1299 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 POTEGQ6S5H5 508 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 USP49Q70CQ1 688 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 SESTD1Q86VW0 696 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 VTI1AQ96AJ9 217 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 CALML4Q96GE6 196 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 SENP6Q9GZR1 1112 aaPredicted RBP18.6■□□□□ 0.57
SUMO1-208ENST00000409627 NT5C3AQ9H0P0 336 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 NRBP2Q9NSY0 501 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 TRPC6Q9Y210 931 aa18.6■□□□□ 0.57
SUMO1-208ENST00000409627 COL1A2P08123 1366 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 A0A1W2PQ27 194 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 A0A1W2PQ64 194 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 A0A1W2PQD8 194 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 XRCC6P12956 609 aaKnown RBP eCLIP18.59■□□□□ 0.57
SUMO1-208ENST00000409627 GRB10Q13322 594 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 TMEM119Q4V9L6 283 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 RESP18Q5W5W9 173 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 C7orf31Q8N865 590 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 CDK5RAP3Q96JB5 506 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 GBP4Q96PP9 640 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 PNMA5Q96PV4 448 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 NACC1Q96RE7 527 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 NIFKQ9BYG3 293 aaKnown RBP18.59■□□□□ 0.57
SUMO1-208ENST00000409627 KIAA1024Q9UPX6 916 aa18.59■□□□□ 0.57
SUMO1-208ENST00000409627 BRCA2P51587 3418 aa18.58■□□□□ 0.57
SUMO1-208ENST00000409627 NRCAMQ92823 1304 aa18.58■□□□□ 0.57
SUMO1-208ENST00000409627 ARVCFO00192 962 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 SMIM10L2AP0DMW4 78 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 SMIM10L2BP0DMW5 78 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 CMA1P23946 247 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 HOXC8P31273 242 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 YWHABP31946 246 aaKnown RBP18.58■□□□□ 0.56
SUMO1-208ENST00000409627 CHMP4BP1P59074 171 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 PPFIA1Q13136 1202 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 SNX17Q15036 470 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 KARSQ15046 597 aaKnown RBP18.58■□□□□ 0.56
SUMO1-208ENST00000409627 ZNF484Q5JVG2 852 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 C1orf53Q5VUE5 145 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 SLC39A5Q6ZMH5 540 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 ANO5Q75V66 913 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 OTUD6AQ7L8S5 288 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 ANKEF1Q9NU02 776 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 DDX19AQ9NUU7 478 aaKnown RBP18.58■□□□□ 0.56
SUMO1-208ENST00000409627 FAM13BQ9NYF5 915 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 HDAC6Q9UBN7 1215 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 CCDC39Q9UFE4 941 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 SEPT9Q9UHD8 586 aaPredicted RBP18.58■□□□□ 0.56
SUMO1-208ENST00000409627 GTF2IRD1Q9UHL9 959 aa18.58■□□□□ 0.56
SUMO1-208ENST00000409627 DDX11L8A8MPP1 907 aa18.57■□□□□ 0.56
SUMO1-208ENST00000409627 INSRRP14616 1297 aa18.57■□□□□ 0.56
SUMO1-208ENST00000409627 CDK7P50613 346 aa18.57■□□□□ 0.56
SUMO1-208ENST00000409627 ZRSR1Q15695 479 aaKnown RBP18.57■□□□□ 0.56
SUMO1-208ENST00000409627 RASSF8Q8NHQ8 419 aa18.57■□□□□ 0.56
SUMO1-208ENST00000409627 DBR1Q9UK59 544 aaKnown RBP18.57■□□□□ 0.56
SUMO1-208ENST00000409627 PPME1Q9Y570 386 aa18.57■□□□□ 0.56
SUMO1-208ENST00000409627 TRIP12Q14669 1992 aaPredicted RBP18.57■□□□□ 0.56
SUMO1-208ENST00000409627 MROH7Q68CQ1 1323 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 FAM237AA0A1B0GTK4 181 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 C17orf102A2RUQ5 167 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 RRN3P2A6NIE6 340 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 ZBTB42B2RXF5 422 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 GNAT1P11488 350 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 PLCG1P19174 1290 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 TARBP2Q15633 366 aaKnown RBP18.56■□□□□ 0.56
SUMO1-208ENST00000409627 GRIK4Q16099 956 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 FAM47CQ5HY64 1035 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 PLA2G4FQ68DD2 849 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 CCDC73Q6ZRK6 1079 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 TRMT1LQ7Z2T5 733 aaKnown RBP18.56■□□□□ 0.56
SUMO1-208ENST00000409627 PIGOQ8TEQ8 1089 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 LMBR1Q8WVP7 490 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 DNM3Q9UQ16 869 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms