RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 ZC2HC1CQ53FD0 456 aaPredicted RBP12.32□□□□□ -0.44
ITGA6-203ENST00000409532 ZNF572Q7Z3I7 529 aaPredicted RBP12.32□□□□□ -0.44
ITGA6-203ENST00000409532 DDX47Q9H0S4 455 aaKnown RBP12.32□□□□□ -0.44
ITGA6-203ENST00000409532 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.32□□□□□ -0.44
ITGA6-203ENST00000409532 PLIN4Q96Q06 1357 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 GOLGA8KD6RF30 607 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 UBAP1LF5GYI3 381 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 F5H6K3 240 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 TOM1O60784 492 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 AFPP02771 609 aaKnown RBP12.31□□□□□ -0.44
ITGA6-203ENST00000409532 NMT1P30419 496 aaKnown RBP12.31□□□□□ -0.44
ITGA6-203ENST00000409532 GUCY1A3Q02108 690 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 KLRC3Q07444 240 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 IRF2BP2Q7Z5L9 587 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 TPH2Q8IWU9 490 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 U2AF1L4Q8WU68 220 aaKnown RBP12.31□□□□□ -0.44
ITGA6-203ENST00000409532 INPP4AQ96PE3 977 aaPredicted RBP12.31□□□□□ -0.44
ITGA6-203ENST00000409532 TSPYL1Q9H0U9 437 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 SEPT11Q9NVA2 429 aaKnown RBP12.31□□□□□ -0.44
ITGA6-203ENST00000409532 ZNF233A6NK53 670 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 EML1O00423 815 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 ABCB4P21439 1286 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 LIG3P49916 1009 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 PAK2Q13177 524 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 ZNF622Q969S3 477 aaKnown RBP eCLIP12.31□□□□□ -0.44
ITGA6-203ENST00000409532 TRIM31Q9BZY9 425 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 AIPL1Q9NZN9 384 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 GCNT4Q9P109 453 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 TSKSQ9UJT2 592 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 POLRMTO00411 1230 aaKnown RBP12.31□□□□□ -0.44
ITGA6-203ENST00000409532 TBCAO75347 108 aaKnown RBP12.31□□□□□ -0.44
ITGA6-203ENST00000409532 HYIQ5T013 277 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 MAEAQ7L5Y9 396 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 MICALL1Q8N3F8 863 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 BCCIPQ9P287 314 aaKnown RBP eCLIP12.31□□□□□ -0.44
ITGA6-203ENST00000409532 NAGPAQ9UK23 515 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 PCDHGC5Q9Y5F6 944 aa12.31□□□□□ -0.44
ITGA6-203ENST00000409532 EBAG9O00559 213 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 CFBP00751 764 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 NR3C1P04150 777 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 USP11P51784 963 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 PRPF4BQ13523 1007 aaKnown RBP12.3□□□□□ -0.44
ITGA6-203ENST00000409532 COG2Q14746 738 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 CEP85LQ5SZL2 805 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 MEX3CQ5U5Q3 659 aaKnown RBP12.3□□□□□ -0.44
ITGA6-203ENST00000409532 FBXO11Q86XK2 927 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 SP8Q8IXZ3 490 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 SLFN12Q8IYM2 578 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 USP38Q8NB14 1042 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 ERMNQ8TAM6 284 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 ETNPPLQ8TBG4 499 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 SYN2Q92777 582 aaPredicted RBP12.3□□□□□ -0.44
ITGA6-203ENST00000409532 AMNQ9BXJ7 453 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 ADAMTSL1Q8N6G6 1762 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 MSH4O15457 936 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 ITGA4P13612 1032 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 SPIRE1Q08AE8 756 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 MYCT1Q8N699 235 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 GDF3Q9NR23 364 aa12.3□□□□□ -0.44
ITGA6-203ENST00000409532 NDUFAB1O14561 156 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 TRIM37O94972 964 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 KIF4AO95239 1232 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 HOXA10P31260 410 aaPredicted RBP12.29□□□□□ -0.44
ITGA6-203ENST00000409532 JAG1P78504 1218 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 SIAH1Q8IUQ4 282 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 RNPC3Q96LT9 517 aaKnown RBP12.29□□□□□ -0.44
ITGA6-203ENST00000409532 SH3GL2Q99962 352 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 PKD2L1Q9P0L9 805 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 ARFGEF1Q9Y6D6 1849 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 SHTN1A0MZ66 631 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 EIF3HO15372 352 aaKnown RBP eCLIP12.29□□□□□ -0.44
ITGA6-203ENST00000409532 NDUFB10O96000 172 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 COPB2P35606 906 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 CYP2J2P51589 502 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 CORO7P57737 925 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 ERVK-9P63128 1117 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 TNNC1P63316 161 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
ITGA6-203ENST00000409532 EDRF1Q3B7T1 1238 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 ALS2CLQ60I27 953 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 PEX26Q7Z412 305 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 DAAM2Q86T65 1068 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 PACS2Q86VP3 889 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 SEPT12Q8IYM1 358 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 METTL13Q8N6R0 699 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 SYT2Q8N9I0 419 aaPredicted RBP12.29□□□□□ -0.44
ITGA6-203ENST00000409532 AMACRQ9UHK6 382 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 PLAAQ9Y263 795 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 RABGAP1Q9Y3P9 1069 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 GRIN2DO15399 1336 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 GH2P01242 217 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 EPB41P11171 864 aaKnown RBP12.29□□□□□ -0.44
ITGA6-203ENST00000409532 RPA1P27694 616 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 SEC24CP53992 1094 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 TBC1D10BQ4KMP7 808 aaPredicted RBP12.29□□□□□ -0.44
ITGA6-203ENST00000409532 MSL1Q68DK7 614 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 SH3BP5LQ7L8J4 393 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 CAVIN3Q969G5 261 aa12.29□□□□□ -0.44
ITGA6-203ENST00000409532 LENG9Q96B70 501 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms