RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 COL4A3BPQ9Y5P4 624 aa10.97□□□□□ -0.65
CUL1-202ENST00000409469 A0A1W2PQC6 194 aa10.97□□□□□ -0.65
CUL1-202ENST00000409469 DHX15O43143 795 aaKnown RBP10.97□□□□□ -0.65
CUL1-202ENST00000409469 CTIFO43310 598 aaKnown RBP10.97□□□□□ -0.65
CUL1-202ENST00000409469 VGLL4Q14135 290 aa10.97□□□□□ -0.65
CUL1-202ENST00000409469 ELF2Q15723 593 aa10.97□□□□□ -0.65
CUL1-202ENST00000409469 CYP26C1Q6V0L0 522 aa10.97□□□□□ -0.65
CUL1-202ENST00000409469 APOBEC3FQ8IUX4 373 aaKnown RBP10.97□□□□□ -0.65
CUL1-202ENST00000409469 SIK3Q9Y2K2 1263 aa10.97□□□□□ -0.65
CUL1-202ENST00000409469 RBBP6Q7Z6E9 1792 aaKnown RBP10.96□□□□□ -0.65
CUL1-202ENST00000409469 TTC36A6NLP5 189 aa10.96□□□□□ -0.65
CUL1-202ENST00000409469 TISP43B9A030 160 aa10.96□□□□□ -0.65
CUL1-202ENST00000409469 ZBED4O75132 1171 aa10.96□□□□□ -0.65
CUL1-202ENST00000409469 FSTL1Q12841 308 aa10.96□□□□□ -0.65
CUL1-202ENST00000409469 MAN2A1Q16706 1144 aa10.96□□□□□ -0.65
CUL1-202ENST00000409469 ARHGEF16Q5VV41 709 aa10.96□□□□□ -0.65
CUL1-202ENST00000409469 EP400NLQ6ZTU2 488 aa10.96□□□□□ -0.65
CUL1-202ENST00000409469 MIER3Q7Z3K6 550 aa10.96□□□□□ -0.65
CUL1-202ENST00000409469 ZNF214Q9UL59 606 aaPredicted RBP10.96□□□□□ -0.65
CUL1-202ENST00000409469 COL11A1P12107 1806 aaPredicted RBP10.96□□□□□ -0.65
CUL1-202ENST00000409469 DOCK1Q14185 1865 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 RPTORQ8N122 1335 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 RCCD1A6NED2 376 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 USP2O75604 605 aaPredicted RBP10.96□□□□□ -0.66
CUL1-202ENST00000409469 NDUFA10O95299 355 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 KCNMA1Q12791 1236 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 TRAF1Q13077 416 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 ERCC6LQ2NKX8 1250 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 DCAF17Q5H9S7 520 aaPredicted RBP10.96□□□□□ -0.66
CUL1-202ENST00000409469 ZNF569Q5MCW4 686 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 PLA2G4FQ68DD2 849 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.96□□□□□ -0.66
CUL1-202ENST00000409469 C1orf186Q6ZWK4 172 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 CLMNQ96JQ2 1002 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 DNAJC7Q99615 494 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 PDCD2LQ9BRP1 358 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 EHMT1Q9H9B1 1298 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 GPRC5CQ9NQ84 441 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 ZNF112Q9UJU3 913 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 GUCA1BQ9UMX6 200 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 DUSP10Q9Y6W6 482 aa10.96□□□□□ -0.66
CUL1-202ENST00000409469 ASTN1O14525 1302 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 PITPNM2Q9BZ72 1349 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 LRRC53A6NM62 1247 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 FAM13AO94988 1023 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 ACTN1P12814 892 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 PPP1R2P41236 205 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 USP14P54578 494 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 SOX10P56693 466 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 ARID5AQ03989 594 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 ARHGAP29Q52LW3 1261 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 TSHZ1Q6ZSZ6 1077 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 RRAGAQ7L523 313 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 IFNLR1Q8IU57 520 aaPredicted RBP10.95□□□□□ -0.66
CUL1-202ENST00000409469 TMTC1Q8IUR5 882 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 CARD6Q9BX69 1037 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 NAA15Q9BXJ9 866 aaKnown RBP10.95□□□□□ -0.66
CUL1-202ENST00000409469 AGO4Q9HCK5 861 aaKnown RBP10.95□□□□□ -0.66
CUL1-202ENST00000409469 PXMP2Q9NR77 195 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 ZHX1Q9UKY1 873 aaPredicted RBP10.95□□□□□ -0.66
CUL1-202ENST00000409469 PCDHB13Q9Y5F0 798 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 EPN1Q9Y6I3 576 aaPredicted RBP10.95□□□□□ -0.66
CUL1-202ENST00000409469 CCP110O43303 1012 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 USO1O60763 962 aaKnown RBP10.95□□□□□ -0.66
CUL1-202ENST00000409469 AKAP3O75969 853 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 CCNE2O96020 404 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 CASQ1P31415 396 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 HERVK_113P62684 666 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 TRIM14Q14142 442 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 KNOP1Q1ED39 458 aaKnown RBP10.95□□□□□ -0.66
CUL1-202ENST00000409469 TCERG1LQ5VWI1 586 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 B3GNT9Q6UX72 402 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 ERGIC2Q96RQ1 377 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 SPON1Q9HCB6 807 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 ARHGAP25P42331 645 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 NPEPPSP55786 919 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 PCNX4Q63HM2 1172 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 MCF2L2Q86YR7 1114 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 SLC35F6Q8N357 371 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 RDH13Q8NBN7 331 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 REPS2Q8NFH8 660 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.95□□□□□ -0.66
CUL1-202ENST00000409469 CCDC51Q96ER9 411 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 NHEJ1Q9H9Q4 299 aaPredicted RBP10.95□□□□□ -0.66
CUL1-202ENST00000409469 ELP3Q9H9T3 547 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 AS3MTQ9HBK9 375 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 TUFT1Q9NNX1 390 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 PNMA2Q9UL42 364 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.95□□□□□ -0.66
CUL1-202ENST00000409469 UBIAD1Q9Y5Z9 338 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 SNCAIPQ9Y6H5 919 aa10.95□□□□□ -0.66
CUL1-202ENST00000409469 ZMYM2Q9UBW7 1377 aa10.94□□□□□ -0.66
CUL1-202ENST00000409469 DNAH12Q6ZR08 3092 aa10.94□□□□□ -0.66
CUL1-202ENST00000409469 SPDYE16A6NNV3 312 aaPredicted RBP10.94□□□□□ -0.66
CUL1-202ENST00000409469 ENC1O14682 589 aa10.94□□□□□ -0.66
CUL1-202ENST00000409469 ZNF263O14978 683 aa10.94□□□□□ -0.66
CUL1-202ENST00000409469 HIP1RO75146 1068 aa10.94□□□□□ -0.66
CUL1-202ENST00000409469 SLU7O95391 586 aaKnown RBP10.94□□□□□ -0.66
CUL1-202ENST00000409469 FECHP22830 423 aa10.94□□□□□ -0.66
CUL1-202ENST00000409469 ODR4Q5SWX8 454 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms