RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 SMC1BQ8NDV3 1235 aa11.43□□□□□ -0.58
SNORD88C-201ENST00000408061 GOLGA5Q8TBA6 731 aa11.43□□□□□ -0.58
SNORD88C-201ENST00000408061 ZNF507Q8TCN5 953 aa11.43□□□□□ -0.58
SNORD88C-201ENST00000408061 DRC1Q96MC2 740 aa11.43□□□□□ -0.58
SNORD88C-201ENST00000408061 CCDC43Q96MW1 224 aaKnown RBP11.43□□□□□ -0.58
SNORD88C-201ENST00000408061 REEP2Q9BRK0 252 aa11.43□□□□□ -0.58
SNORD88C-201ENST00000408061 VTA1Q9NP79 307 aa11.43□□□□□ -0.58
SNORD88C-201ENST00000408061 SLC39A2Q9NP94 309 aa11.43□□□□□ -0.58
SNORD88C-201ENST00000408061 CGNQ9P2M7 1197 aaKnown RBP11.43□□□□□ -0.58
SNORD88C-201ENST00000408061 ZKSCAN5Q9Y2L8 839 aa11.43□□□□□ -0.58
SNORD88C-201ENST00000408061 PCDHB13Q9Y5F0 798 aa11.43□□□□□ -0.58
SNORD88C-201ENST00000408061 MYH11P35749 1972 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 IGKV6D-21A0A0A0MT36 114 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 ESPNB1AK53 854 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 H0YCG3 227 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 DDX39AO00148 427 aaKnown RBP11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 CCNE2O96020 404 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 SLC10A3P09131 477 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 SUPT20HL2P0C7V6 817 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 CYP2C8P10632 490 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 ATP1A3P13637 1013 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 MSNP26038 577 aaKnown RBP11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 RPL13P26373 211 aaKnown RBP11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 RARRES1P49788 294 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 STX17P56962 302 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 RTP1P59025 263 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 ACTR2P61160 394 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 PPP2R3AQ06190 1150 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 MYBPC2Q14324 1141 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 ZNF792Q3KQV3 632 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 FAM160B1Q5W0V3 765 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 ANKRD40Q6AI12 368 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 PADI6Q6TGC4 694 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 METTL7BQ6UX53 244 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 MAMDC4Q6UXC1 1216 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 EPM2AIP1Q7L775 607 aaPredicted RBP11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 FILIP1Q7Z7B0 1213 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 VSTM4Q8IW00 320 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 TRMT44Q8IYL2 757 aaKnown RBP11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 FAM43AQ8N2R8 423 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 CCDC150Q8NCX0 1101 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 BANK1Q8NDB2 785 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 MCPH1Q8NEM0 835 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 PIGOQ8TEQ8 1089 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 SCFD2Q8WU76 684 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 TMEM174Q8WUU8 243 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 SEPT1Q8WYJ6 367 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 KCNN1Q92952 543 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 ZFP91Q96JP5 570 aaPredicted RBP11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 PURBQ96QR8 312 aaKnown RBP11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 UIMC1Q96RL1 719 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 SRRTQ9BXP5 876 aaKnown RBP11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 ST6GALNAC4Q9H4F1 302 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 GPBP1L1Q9HC44 474 aaPredicted RBP11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 RTN4Q9NQC3 1192 aaKnown RBP11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 NRBP2Q9NSY0 501 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 TRAF3IP3Q9Y228 551 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 MAFBQ9Y5Q3 323 aaPredicted RBP11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 TLL2Q9Y6L7 1015 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 ZNF236Q9UL36 1845 aa11.42□□□□□ -0.58
SNORD88C-201ENST00000408061 ASTN1O14525 1302 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 ITIH6Q6UXX5 1313 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 PLXNA1Q9UIW2 1896 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 A0A1W2PQC6 194 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 RBM47A0AV96 593 aaKnown RBP11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 KCNJ18B7U540 433 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 CALUO43852 315 aaPredicted RBP11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 DGAT1O75907 488 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 ALDH1A1P00352 501 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 HOXC6P09630 235 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 DNM2P50570 870 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 MARSP56192 900 aaKnown RBP11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 TRIM14Q14142 442 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 KCNJ12Q14500 433 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 HSP90AA2PQ14568 343 aaPredicted RBP11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 TTLL4Q14679 1199 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 KNOP1Q1ED39 458 aaKnown RBP11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 ZCWPW2Q504Y3 356 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 SPECC1LQ69YQ0 1117 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 APTXQ7Z2E3 356 aaKnown RBP11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 CCDC186Q7Z3E2 898 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 PLEKHH3Q7Z736 793 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 ZC3H3Q8IXZ2 948 aaKnown RBP11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 ANKRD13CQ8N6S4 541 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 AFAP1L1Q8TED9 768 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 KIFAP3Q92845 792 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 HVCN1Q96D96 273 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 FAM167AQ96KS9 214 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 PTPN18Q99952 460 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 DUSP9Q99956 384 aaKnown RBP11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 SEMA6BQ9H3T3 888 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 MRPL44Q9H9J2 332 aaKnown RBP11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 PKD2L1Q9P0L9 805 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 DDX41Q9UJV9 622 aaKnown RBP11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 MAPK8IP1Q9UQF2 711 aa11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNORD88C-201ENST00000408061 IGSF9BQ9UPX0 1349 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 PLXNB2O15031 1838 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 N4BP3O15049 544 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 CETN3O15182 167 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms