RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 SIK3Q9Y2K2 1263 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 SMARCA1P28370 1054 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 GGT7Q9UJ14 662 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 ATP6V0A2Q9Y487 856 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 RGL2O15211 777 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 PPP1R37O75864 691 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 MYBL1P10243 752 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 ADRA2BP18089 450 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 GBP2P32456 591 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-206ENST00000405546 EPHB4P54760 987 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 MAEAQ7L5Y9 396 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 PIGOQ8TEQ8 1089 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 TDRD3Q9H7E2 651 aaKnown RBP16.43■□□□□ 0.22
ATG4B-206ENST00000405546 LUC7LQ9NQ29 371 aaKnown RBP16.43■□□□□ 0.22
ATG4B-206ENST00000405546 SEPT11Q9NVA2 429 aaKnown RBP16.43■□□□□ 0.22
ATG4B-206ENST00000405546 TMCO5BA8MYB1 307 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 F5H6K3 240 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 hCG_1984214I3L0E3 225 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 POLRMTO00411 1230 aaKnown RBP16.43■□□□□ 0.22
ATG4B-206ENST00000405546 MED24O75448 989 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 GCNT3O95395 438 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 KLRC3Q07444 240 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 ZNF713Q8N859 430 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-206ENST00000405546 CYP2W1Q8TAV3 490 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 THOC1Q96FV9 657 aaKnown RBP16.43■□□□□ 0.22
ATG4B-206ENST00000405546 CRAMP1Q96RY5 1269 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 SH2D4AQ9H788 454 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 QTRT2Q9H974 415 aaKnown RBP16.43■□□□□ 0.22
ATG4B-206ENST00000405546 SMIM23A6NLE4 172 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 EDIL3O43854 480 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 MMP10P09238 476 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 ARHGAP4P98171 946 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 GABPAQ06546 454 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 PTGISQ16647 500 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 ACCSLQ4AC99 568 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 TPH2Q8IWU9 490 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 MIEF2Q96C03 454 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 EPN3Q9H201 632 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 BHMT2Q9H2M3 363 aa16.43■□□□□ 0.22
ATG4B-206ENST00000405546 DNM1LO00429 736 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 TBCAO75347 108 aaKnown RBP16.42■□□□□ 0.22
ATG4B-206ENST00000405546 PSMD2Q13200 908 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 LRCH2Q5VUJ6 765 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 PPP4R3AQ6IN85 833 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 APOBEC3HQ6NTF7 200 aaKnown RBP16.42■□□□□ 0.22
ATG4B-206ENST00000405546 CCDC174Q6PII3 467 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 C15orf52Q6ZUT6 534 aaKnown RBP16.42■□□□□ 0.22
ATG4B-206ENST00000405546 FBXO11Q86XK2 927 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 ERMNQ8TAM6 284 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 RGL1Q9NZL6 768 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 PHF20L1A8MW92 1017 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 KCNH2Q12809 1159 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 PDXDC1Q6P996 788 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 LRRC55Q6ZSA7 311 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 RDH13Q8NBN7 331 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 CERKQ8TCT0 537 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 DNAJC19Q96DA6 116 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 MTMR8Q96EF0 704 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 PLAAQ9Y263 795 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 HYOU1Q9Y4L1 999 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 CCDC88AQ3V6T2 1871 aa16.42■□□□□ 0.22
ATG4B-206ENST00000405546 GH2P01242 217 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 KCNMA1Q12791 1236 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 SFR1Q86XK3 245 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 BCAS3Q9H6U6 928 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 PALMO75781 387 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 ASIC2Q16515 512 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 ABCB5Q2M3G0 1257 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 TAF4BQ92750 862 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 RPGRIP1Q96KN7 1286 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 AMNQ9BXJ7 453 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.41■□□□□ 0.222e-6■■■■■ 96.1
ATG4B-206ENST00000405546 ARMCX3Q9UH62 379 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-206ENST00000405546 TPX2Q9ULW0 747 aaKnown RBP16.41■□□□□ 0.22
ATG4B-206ENST00000405546 KDM3AQ9Y4C1 1321 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 A0A1W2PQJ5 194 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 SLC9A1P19634 815 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 SNCBQ16143 134 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 PNMA8AQ86V59 439 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-206ENST00000405546 FAM228AQ86W67 206 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 CATSPER3Q86XQ3 398 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 PI4KBQ9UBF8 816 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 MCM8Q9UJA3 840 aa16.41■□□□□ 0.22
ATG4B-206ENST00000405546 CASZ1Q86V15 1759 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 ANO9A1A5B4 782 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 RSPH10B2B2RC85 870 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 TCP10L2B9ZVM9 353 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 FSBPO95073 299 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 RSPH10BP0C881 870 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 GCFC2P16383 781 aaKnown RBP16.4■□□□□ 0.22
ATG4B-206ENST00000405546 CYP11B2P19099 503 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 CASP5P51878 434 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 CTTNQ14247 550 aaKnown RBP16.4■□□□□ 0.22
ATG4B-206ENST00000405546 CYB5D1Q6P9G0 228 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 MICALCLQ6ZW33 695 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 MDM1Q8TC05 714 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 SCFD1Q8WVM8 642 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 TCP11Q8WWU5 503 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 CYFIP2Q96F07 1278 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 CCDC17Q96LX7 622 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms