RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 MED24O75448 989 aa32.89■■■□□ 2.86
USP42-202ENST00000404008 OATP04181 439 aa32.89■■■□□ 2.86
USP42-202ENST00000404008 RPA1P27694 616 aa32.89■■■□□ 2.86
USP42-202ENST00000404008 CDC25AP30304 524 aa32.89■■■□□ 2.86
USP42-202ENST00000404008 FAM47CQ5HY64 1035 aa32.89■■■□□ 2.86
USP42-202ENST00000404008 CATSPER3Q86XQ3 398 aa32.89■■■□□ 2.86
USP42-202ENST00000404008 TPH2Q8IWU9 490 aa32.89■■■□□ 2.86
USP42-202ENST00000404008 LEO1Q8WVC0 666 aaPredicted RBP32.89■■■□□ 2.86
USP42-202ENST00000404008 FAM167AQ96KS9 214 aa32.89■■■□□ 2.86
USP42-202ENST00000404008 CLIC6Q96NY7 704 aa32.89■■■□□ 2.86
USP42-202ENST00000404008 CSRNP2Q9H175 543 aa32.89■■■□□ 2.86
USP42-202ENST00000404008 ARID2Q68CP9 1835 aa32.89■■■□□ 2.86
USP42-202ENST00000404008 STBD1O95210 358 aa32.88■■■□□ 2.85
USP42-202ENST00000404008 HOXC8P31273 242 aa32.88■■■□□ 2.85
USP42-202ENST00000404008 C4orf19Q8IY42 314 aa32.88■■■□□ 2.85
USP42-202ENST00000404008 SNX29Q8TEQ0 813 aa32.88■■■□□ 2.85
USP42-202ENST00000404008 BBXQ8WY36 941 aaPredicted RBP32.88■■■□□ 2.85
USP42-202ENST00000404008 MMTAG2Q9BU76 263 aaKnown RBP32.88■■■□□ 2.85
USP42-202ENST00000404008 SCAND2PQ9GZW5 306 aaPredicted RBP32.88■■■□□ 2.85
USP42-202ENST00000404008 GTF2IRD1Q9UHL9 959 aa32.88■■■□□ 2.85
USP42-202ENST00000404008 TRIP12Q14669 1992 aaPredicted RBP32.88■■■□□ 2.85
USP42-202ENST00000404008 KRT79Q5XKE5 535 aa32.87■■■□□ 2.85
USP42-202ENST00000404008 SPATA32Q96LK8 384 aa32.87■■■□□ 2.85
USP42-202ENST00000404008 MROH7Q68CQ1 1323 aa32.87■■■□□ 2.85
USP42-202ENST00000404008 HBP1O60381 514 aa32.86■■■□□ 2.85
USP42-202ENST00000404008 LYPLA2O95372 231 aa32.86■■■□□ 2.85
USP42-202ENST00000404008 CCT6AP40227 531 aaKnown RBP32.86■■■□□ 2.85
USP42-202ENST00000404008 PPFIA1Q13136 1202 aa32.86■■■□□ 2.85
USP42-202ENST00000404008 TRIM60Q495X7 471 aa32.86■■■□□ 2.85
USP42-202ENST00000404008 XKR3Q5GH77 459 aa32.86■■■□□ 2.85
USP42-202ENST00000404008 TRMT1LQ7Z2T5 733 aaKnown RBP32.86■■■□□ 2.85
USP42-202ENST00000404008 ANKRD33Q7Z3H0 272 aa32.86■■■□□ 2.85
USP42-202ENST00000404008 TNPO1Q92973 898 aaKnown RBP32.86■■■□□ 2.85
USP42-202ENST00000404008 NRCAMQ92823 1304 aa32.85■■■□□ 2.85
USP42-202ENST00000404008 INSRRP14616 1297 aa32.85■■■□□ 2.85
USP42-202ENST00000404008 RTP1P59025 263 aa32.85■■■□□ 2.85
USP42-202ENST00000404008 HIC1Q14526 733 aa32.85■■■□□ 2.85
USP42-202ENST00000404008 GDF6Q6KF10 455 aaPredicted RBP32.85■■■□□ 2.85
USP42-202ENST00000404008 LMBR1Q8WVP7 490 aa32.85■■■□□ 2.85
USP42-202ENST00000404008 NRBP2Q9NSY0 501 aa32.85■■■□□ 2.85
USP42-202ENST00000404008 SETD4Q9NVD3 440 aa32.85■■■□□ 2.85
USP42-202ENST00000404008 LOXHD1Q8IVV2 1947 aa32.85■■■□□ 2.85
USP42-202ENST00000404008 MUTP22033 750 aa32.84■■■□□ 2.85
USP42-202ENST00000404008 ME1P48163 572 aa32.84■■■□□ 2.85
USP42-202ENST00000404008 GRIK4Q16099 956 aa32.84■■■□□ 2.85
USP42-202ENST00000404008 ECM1Q16610 540 aa32.84■■■□□ 2.85
USP42-202ENST00000404008 ANO5Q75V66 913 aa32.84■■■□□ 2.85
USP42-202ENST00000404008 FAM126BQ8IXS8 530 aa32.84■■■□□ 2.85
USP42-202ENST00000404008 PCDHA7Q9UN72 937 aa32.84■■■□□ 2.85
USP42-202ENST00000404008 COL1A2P08123 1366 aa32.84■■■□□ 2.85
USP42-202ENST00000404008 C17orf102A2RUQ5 167 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 ZBTB42B2RXF5 422 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 PQBP1O60828 265 aaKnown RBP32.83■■■□□ 2.85
USP42-202ENST00000404008 CUTAO60888 179 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 CAPN15O75808 1086 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 SPECC1Q5M775 1068 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 AXDND1Q5T1B0 1012 aaPredicted RBP32.83■■■□□ 2.85
USP42-202ENST00000404008 POTEGQ6S5H5 508 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 CABP7Q86V35 215 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 ZNF579Q8NAF0 562 aaKnown RBP32.83■■■□□ 2.85
USP42-202ENST00000404008 TOX2Q96NM4 488 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 NIFKQ9BYG3 293 aaKnown RBP32.83■■■□□ 2.85
USP42-202ENST00000404008 SEPT9Q9UHD8 586 aaPredicted RBP32.83■■■□□ 2.85
USP42-202ENST00000404008 ATP11BQ9Y2G3 1177 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 TMEM150BA6NC51 233 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 DDX11L8A8MPP1 907 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 B4GALT4O60513 344 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 YWHABP31946 246 aaKnown RBP32.83■■■□□ 2.85
USP42-202ENST00000404008 UBA7P41226 1012 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 ZNF484Q5JVG2 852 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 EPSTI1Q96J88 318 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 HTATIP2Q9BUP3 242 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 TRPV6Q9H1D0 765 aa32.83■■■□□ 2.85
USP42-202ENST00000404008 TRMT13Q9NUP7 481 aaKnown RBP32.83■■■□□ 2.85
USP42-202ENST00000404008 KDM3AQ9Y4C1 1321 aa32.82■■■□□ 2.84
USP42-202ENST00000404008 RRN3P2A6NIE6 340 aa32.82■■■□□ 2.84
USP42-202ENST00000404008 SLC26A4O43511 780 aa32.82■■■□□ 2.84
USP42-202ENST00000404008 CD4P01730 458 aa32.82■■■□□ 2.84
USP42-202ENST00000404008 GNAT1P11488 350 aa32.82■■■□□ 2.84
USP42-202ENST00000404008 ADAM17P78536 824 aa32.82■■■□□ 2.84
USP42-202ENST00000404008 TLE2Q04725 743 aa32.82■■■□□ 2.84
USP42-202ENST00000404008 HYIQ5T013 277 aa32.82■■■□□ 2.84
USP42-202ENST00000404008 MARCH8Q5T0T0 291 aa32.82■■■□□ 2.84
USP42-202ENST00000404008 USP49Q70CQ1 688 aa32.82■■■□□ 2.84
USP42-202ENST00000404008 TRAPPC12Q8WVT3 735 aa32.82■■■□□ 2.84
USP42-202ENST00000404008 SYMPKQ92797 1274 aaKnown RBP32.82■■■□□ 2.84
USP42-202ENST00000404008 GDPD2Q9HCC8 539 aa32.82■■■□□ 2.84
USP42-202ENST00000404008 ZBTB39O15060 712 aa32.81■■■□□ 2.84
USP42-202ENST00000404008 IGBP1P78318 339 aa32.81■■■□□ 2.84
USP42-202ENST00000404008 ZNF200P98182 395 aaPredicted RBP32.81■■■□□ 2.84
USP42-202ENST00000404008 PTGISQ16647 500 aa32.81■■■□□ 2.84
USP42-202ENST00000404008 CTAGE1Q96RT6 745 aa32.81■■■□□ 2.84
USP42-202ENST00000404008 CCSER1Q9C0I3 900 aa32.81■■■□□ 2.84
USP42-202ENST00000404008 KIAA1024Q9UPX6 916 aa32.81■■■□□ 2.84
USP42-202ENST00000404008 TNRC18O15417 2968 aaPredicted RBP32.81■■■□□ 2.84
USP42-202ENST00000404008 RGS19P49795 217 aa32.8■■■□□ 2.84
USP42-202ENST00000404008 TARBP2Q15633 366 aaKnown RBP32.8■■■□□ 2.84
USP42-202ENST00000404008 PLA2G4FQ68DD2 849 aa32.8■■■□□ 2.84
USP42-202ENST00000404008 OTUD6AQ7L8S5 288 aa32.8■■■□□ 2.84
USP42-202ENST00000404008 PIGOQ8TEQ8 1089 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms