RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 RPS6KA1Q15418 735 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 SMIM5Q71RC9 77 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 NLRX1Q86UT6 975 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 COA7Q96BR5 231 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 MAK16Q9BXY0 300 aaKnown RBP10.07□□□□□ -0.8
CDH23-203ENST00000398788 GRIN2DO15399 1336 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 SOS2Q07890 1332 aaPredicted RBP10.07□□□□□ -0.8
CDH23-203ENST00000398788 KCNQ2O43526 872 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 CALUO43852 315 aaPredicted RBP10.07□□□□□ -0.8
CDH23-203ENST00000398788 ZBED4O75132 1171 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 SMNDC1O75940 238 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDH23-203ENST00000398788 GDF11O95390 407 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 IGKV5-2P06315 115 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 OR52Z1P0C646 297 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 ERCC5P28715 1186 aaPredicted RBP10.07□□□□□ -0.8
CDH23-203ENST00000398788 STX2P32856 288 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 PPP1R2P41236 205 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 RASSF7Q02833 373 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 SFMBT2Q5VUG0 894 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 BSPRYQ5W0U4 402 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 TRAPPC11Q7Z392 1133 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 SPATA24Q86W54 205 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 CCDC105Q8IYK2 499 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 MYOCDQ8IZQ8 938 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 CENPKQ9BS16 269 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 LSM14BQ9BX40 385 aaKnown RBP10.07□□□□□ -0.8
CDH23-203ENST00000398788 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDH23-203ENST00000398788 NKIRAS1Q9NYS0 192 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 UTP11Q9Y3A2 253 aaKnown RBP10.07□□□□□ -0.8
CDH23-203ENST00000398788 LAMC1P11047 1609 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 SETBP1Q9Y6X0 1596 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 C1orf167Q5SNV9 1468 aa10.07□□□□□ -0.8
CDH23-203ENST00000398788 CDK12Q9NYV4 1490 aaPredicted RBP10.07□□□□□ -0.8
CDH23-203ENST00000398788 PPEF1O14829 653 aaPredicted RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 RTN2O75298 545 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 MYL1P05976 194 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 ZCCHC18P0CG32 403 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 DLATP10515 647 aaKnown RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 GCLCP48506 637 aaPredicted RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 POLA2Q14181 598 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 LRRC14Q15048 493 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 TAF12Q16514 161 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 MAB21L3Q8N8X9 362 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 LRRC8CQ8TDW0 803 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 NAP1L4Q99733 375 aaKnown RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 OSBPL7Q9BZF2 842 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 ATP8A2Q9NTI2 1148 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 ARMCX3Q9UH62 379 aaPredicted RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 ZNF232Q9UNY5 417 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 XRCC5P13010 732 aaKnown RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 SERPINB3P29508 390 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 POLR2FP61218 127 aaKnown RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 RASGRF1Q13972 1273 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 VWA3BQ502W6 1294 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 RNF220Q5VTB9 566 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 CAPN12Q6ZSI9 719 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 METTL13Q8N6R0 699 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 GDAP1Q8TB36 358 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 MS4A14Q96JA4 679 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 CARD9Q9H257 536 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 PPP1R9AQ9ULJ8 1098 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 KIAA1024Q9UPX6 916 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 PCDHGC5Q9Y5F6 944 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 RNF8O76064 485 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 CACNB3P54284 484 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 SH3BGRP55822 239 aaPredicted RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 KRT31Q15323 416 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 RNF169Q8NCN4 708 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 KIFAP3Q92845 792 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 RNF34Q969K3 372 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 CLMNQ96JQ2 1002 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 AZI2Q9H6S1 392 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 PRDM16Q9HAZ2 1276 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 DNAAF2Q9NVR5 837 aaKnown RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 RAD17O75943 681 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 ALDH5A1P51649 535 aaPredicted RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 NKX1-1Q15270 411 aaPredicted RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 FAM26FQ5R3K3 315 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 SUSD4Q5VX71 490 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 TAOK1Q7L7X3 1001 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 OTUD6AQ7L8S5 288 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 MIER3Q7Z3K6 550 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 METTL16Q86W50 562 aaKnown RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 FBXO11Q86XK2 927 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 FAM178BQ8IXR5 827 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 SCYL3Q8IZE3 742 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 PPM1KQ8N3J5 372 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 SH3GL2Q99962 352 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 LZTS2Q9BRK4 669 aa10.06□□□□□ -0.8
CDH23-203ENST00000398788 CNOT10Q9H9A5 744 aaKnown RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 NHEJ1Q9H9Q4 299 aaPredicted RBP10.06□□□□□ -0.8
CDH23-203ENST00000398788 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDH23-203ENST00000398788 USP17L3A6NCW0 530 aa10.05□□□□□ -0.8
CDH23-203ENST00000398788 USP17L4A6NCW7 530 aa10.05□□□□□ -0.8
CDH23-203ENST00000398788 TMCC1O94876 653 aa10.05□□□□□ -0.8
CDH23-203ENST00000398788 ADD2P35612 726 aa10.05□□□□□ -0.8
CDH23-203ENST00000398788 STAT1P42224 750 aa10.05□□□□□ -0.8
CDH23-203ENST00000398788 KCNJ2P63252 427 aa10.05□□□□□ -0.8
CDH23-203ENST00000398788 NR1I3Q14994 352 aa10.05□□□□□ -0.8
CDH23-203ENST00000398788 XKR9Q5GH70 373 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms