RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 AFAP1L2Q8N4X5 818 aa12.49□□□□□ -0.41
PCDHGA8-201ENST00000398604 P3H4Q92791 437 aa12.49□□□□□ -0.41
PCDHGA8-201ENST00000398604 NDST4Q9H3R1 872 aa12.49□□□□□ -0.41
PCDHGA8-201ENST00000398604 EPB41L5Q9HCM4 733 aa12.49□□□□□ -0.41
PCDHGA8-201ENST00000398604 RNF146Q9NTX7 359 aa12.49□□□□□ -0.41
PCDHGA8-201ENST00000398604 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA8-201ENST00000398604 TRIM49BA6NDI0 452 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 RGL2O15211 777 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 PSAPP07602 524 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 BASP1P80723 227 aaKnown RBP12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 MTMR1Q13613 665 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 SRGAP1Q7Z6B7 1085 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 MSTO1Q9BUK6 570 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 HOMER3Q9NSC5 361 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 ATP8A1Q9Y2Q0 1164 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 TMTC4Q5T4D3 741 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 DNAJC24Q6P3W2 148 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 CCDC170Q8IYT3 715 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 RPGRIP1Q96KN7 1286 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 BRIP1Q9BX63 1249 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 ZBTB5O15062 677 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 MOCS3O95396 460 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 LMNB1P20700 586 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 ATP11AP98196 1134 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 TBK1Q9UHD2 729 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 TNS2Q63HR2 1409 aa12.48□□□□□ -0.41
PCDHGA8-201ENST00000398604 ABCC12Q96J65 1359 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 ZWINTO95229 277 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 CDC27P30260 824 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 GCLMP48507 274 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 ARHGEF6Q15052 776 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 ZKSCAN8Q15776 578 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 PPP6R3Q5H9R7 873 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 DSTYKQ6XUX3 929 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 C2orf69Q8N8R5 385 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 BCAS4Q8TDM0 211 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 HAUS2Q9NVX0 235 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 DAAM1Q9Y4D1 1078 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 URB1O60287 2271 aaKnown RBP12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 RPAP1Q9BWH6 1393 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 POTEB3A0JP26 581 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 ZNF233A6NK53 670 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 POTECB2RU33 542 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 ARHGAP4P98171 946 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 QRICH1Q2TAL8 776 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 POTEBQ6S5H4 581 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 CROCCP2Q86T23 111 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 ZBED2Q9BTP6 218 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 MAGEF1Q9HAY2 307 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 CDC23Q9UJX2 597 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 MEGF6O75095 1541 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 HEXIM1O94992 359 aaKnown RBP12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 AKR1B1P15121 316 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 ECE1P42892 770 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 SGO2Q562F6 1265 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 TWF2Q6IBS0 349 aaKnown RBP12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 ALKBH5Q6P6C2 394 aaKnown RBP12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 RAPH1Q70E73 1250 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 METTL23Q86XA0 190 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 XRN1Q8IZH2 1706 aaKnown RBP12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 PARD3BQ8TEW8 1205 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 PLA2G12BQ9BX93 195 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 NUF2Q9BZD4 464 aa12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 RPF1Q9H9Y2 349 aaKnown RBP12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 CPSF3Q9UKF6 684 aaKnown RBP12.47□□□□□ -0.41
PCDHGA8-201ENST00000398604 GSG1L2A8MUP6 293 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 SLC16A4O15374 487 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 MYL3P08590 195 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 PTPREP23469 700 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 R3HDM1Q15032 1099 aaKnown RBP12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 ENOX1Q8TC92 643 aaKnown RBP12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 KIF9Q9HAQ2 790 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 RGPD8O14715 1765 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 SEC31AO94979 1220 aaKnown RBP12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 PHBP35232 272 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 STAT3P40763 770 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 HMGCS2P54868 508 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 CCDC144BQ3MJ40 725 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 CYFIP1Q7L576 1253 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 SFR1Q86XK3 245 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 PASD1Q8IV76 773 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 STAG2Q8N3U4 1231 aa12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 G3BP2Q9UN86 482 aaKnown RBP12.46□□□□□ -0.41
PCDHGA8-201ENST00000398604 CLDN3O15551 220 aa12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 SWSAP1Q6NVH7 229 aa12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 GRK7Q8WTQ7 553 aa12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 HDAC11Q96DB2 347 aa12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 CHMP6Q96FZ7 201 aa12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 PPP1R13BQ96KQ4 1090 aa12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 AP1M1Q9BXS5 423 aa12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 ABCB11O95342 1321 aa12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 PASKQ96RG2 1323 aa12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 POTEFA5A3E0 1075 aa12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 GPC4O75487 556 aa12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 POTEIP0CG38 1075 aa12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 TROVE2P10155 538 aaKnown RBP eCLIP12.46□□□□□ -0.42
PCDHGA8-201ENST00000398604 ELF1P32519 619 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms