RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 CNKSR3Q6P9H4 555 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 DIS3L2Q8IYB7 885 aaKnown RBP18.88■□□□□ 0.61
APTR-201ENST00000398043 TRAPPC12Q8WVT3 735 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 HAS1Q92839 578 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 TEKT3Q9BXF9 490 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 PBX4Q9BYU1 374 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 FTOQ9C0B1 505 aaKnown RBP eCLIP18.88■□□□□ 0.61
APTR-201ENST00000398043 DISC1Q9NRI5 854 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 TRPC6Q9Y210 931 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 GTF3C3Q9Y5Q9 886 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 SLC4A7Q9Y6M7 1214 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 CHD7Q9P2D1 2997 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 ARID2Q68CP9 1835 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 TTC3P53804 2025 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 COL6A3P12111 3177 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 TMEM265A0A087WTH1 108 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 WDR64B1ANS9 1081 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 WNT7AO00755 349 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 ST18O60284 1047 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 ZNF862O60290 1169 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 COL1A2P08123 1366 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 ACTN1P12814 892 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 SFNP31947 248 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 IGBP1P78318 339 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 HMGN5P82970 282 aaKnown RBP18.87■□□□□ 0.61
APTR-201ENST00000398043 PLEKHG4Q58EX7 1191 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 PCDHA2Q9Y5H9 948 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 CDH23Q9H251 3354 aa18.87■□□□□ 0.61
APTR-201ENST00000398043 TBX3O15119 743 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 JAK3P52333 1124 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 FOSBP53539 338 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 UGCGQ16739 394 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 MTHFD1LQ6UB35 978 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 RDM1Q8NG50 284 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 DNAJB3Q8WWF6 145 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 BBXQ8WY36 941 aaPredicted RBP18.86■□□□□ 0.61
APTR-201ENST00000398043 TNPO1Q92973 898 aaKnown RBP18.86■□□□□ 0.61
APTR-201ENST00000398043 TMX3Q96JJ7 454 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 FAM20AQ96MK3 541 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 GUCD1Q96NT3 240 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 SEMA6BQ9H3T3 888 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 BRMS1Q9HCU9 246 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 GABBR1Q9UBS5 961 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 VAV3Q9UKW4 847 aa18.86■□□□□ 0.61
APTR-201ENST00000398043 ABHD14A-ACY1A0A1B0GW23 586 aa18.85■□□□□ 0.61
APTR-201ENST00000398043 CCNT1O60563 726 aaKnown RBP18.85■□□□□ 0.61
APTR-201ENST00000398043 STBD1O95210 358 aa18.85■□□□□ 0.61
APTR-201ENST00000398043 CTSHP09668 335 aa18.85■□□□□ 0.61
APTR-201ENST00000398043 ATP2A2P16615 1042 aaKnown RBP18.85■□□□□ 0.61
APTR-201ENST00000398043 WDR5P61964 334 aaKnown RBP18.85■□□□□ 0.61
APTR-201ENST00000398043 PPP2R5CQ13362 524 aa18.85■□□□□ 0.61
APTR-201ENST00000398043 TRIM29Q14134 588 aa18.85■□□□□ 0.61
APTR-201ENST00000398043 ZNF484Q5JVG2 852 aa18.85■□□□□ 0.61
APTR-201ENST00000398043 ZNF697Q5TEC3 545 aa18.85■□□□□ 0.61
APTR-201ENST00000398043 DBF4BQ8NFT6 615 aa18.85■□□□□ 0.61
APTR-201ENST00000398043 FBXO18Q8NFZ0 1043 aa18.85■□□□□ 0.61
APTR-201ENST00000398043 PHOSPHO2Q8TCD6 241 aa18.85■□□□□ 0.61
APTR-201ENST00000398043 C8orf76Q96K31 380 aa18.85■□□□□ 0.61
APTR-201ENST00000398043 NAP1L4Q99733 375 aaKnown RBP18.85■□□□□ 0.61
APTR-201ENST00000398043 TCEAL9Q9UHQ7 104 aa18.85■□□□□ 0.61
APTR-201ENST00000398043 YBX2Q9Y2T7 364 aaKnown RBP18.85■□□□□ 0.61
APTR-201ENST00000398043 SMIM35A0A1B0GVV1 85 aa18.84■□□□□ 0.61
APTR-201ENST00000398043 ZBBXA8MT70 800 aa18.84■□□□□ 0.61
APTR-201ENST00000398043 EML1O00423 815 aa18.84■□□□□ 0.61
APTR-201ENST00000398043 CHMP2AO43633 222 aa18.84■□□□□ 0.61
APTR-201ENST00000398043 KLRC1P26715 233 aa18.84■□□□□ 0.61
APTR-201ENST00000398043 GUCY1B3Q02153 619 aa18.84■□□□□ 0.61
APTR-201ENST00000398043 SPIRE1Q08AE8 756 aa18.84■□□□□ 0.61
APTR-201ENST00000398043 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
APTR-201ENST00000398043 SLC9A7Q96T83 725 aa18.84■□□□□ 0.61
APTR-201ENST00000398043 SAMM50Q9Y512 469 aa18.84■□□□□ 0.61
APTR-201ENST00000398043 C22orf31O95567 290 aa18.83■□□□□ 0.6
APTR-201ENST00000398043 RPLP2P05387 115 aaKnown RBP18.83■□□□□ 0.6
APTR-201ENST00000398043 RABGGTBP53611 331 aa18.83■□□□□ 0.6
APTR-201ENST00000398043 DEFB103AP81534 67 aa18.83■□□□□ 0.6
APTR-201ENST00000398043 MIER3Q7Z3K6 550 aa18.83■□□□□ 0.6
APTR-201ENST00000398043 TIFAQ96CG3 184 aa18.83■□□□□ 0.6
APTR-201ENST00000398043 CEP89Q96ST8 783 aa18.83■□□□□ 0.6
APTR-201ENST00000398043 FOXP1Q9H334 677 aaPredicted RBP18.83■□□□□ 0.6
APTR-201ENST00000398043 PCDHA11Q9Y5I1 949 aa18.83■□□□□ 0.6
APTR-201ENST00000398043 NLRC5Q86WI3 1866 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 KDM3AQ9Y4C1 1321 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 OATP04181 439 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 MYOGP15173 224 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 MRPS6P82932 125 aaKnown RBP18.82■□□□□ 0.6
APTR-201ENST00000398043 PRKCEQ02156 737 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 IKBKEQ14164 716 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 LPIN1Q14693 890 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 TARBP2Q15633 366 aaKnown RBP18.82■□□□□ 0.6
APTR-201ENST00000398043 RAB30Q15771 203 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 FBXO47Q5MNV8 452 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 RSPH3Q86UC2 560 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 KIAA0319LQ8IZA0 1049 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 LINC01465Q8N7H1 131 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 FAM167AQ96KS9 214 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 FAM161BQ96MY7 647 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 FAM49AQ9H0Q0 323 aaPredicted RBP18.82■□□□□ 0.6
APTR-201ENST00000398043 CDY2AQ9Y6F7 541 aa18.82■□□□□ 0.6
APTR-201ENST00000398043 EFCAB14O75071 495 aa18.81■□□□□ 0.6
APTR-201ENST00000398043 MCM2P49736 904 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms