RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 IGDCC4Q8TDY8 1250 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 LMBR1Q8WVP7 490 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 SEPT1Q8WYJ6 367 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 RRP36Q96EU6 259 aaKnown RBP10.08□□□□□ -0.8
CAPN3-208ENST00000397204 CDHR1Q96JP9 859 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 LZTS2Q9BRK4 669 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 C11orf84Q9BUA3 381 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-208ENST00000397204 UPF3BQ9BZI7 483 aaKnown RBP10.08□□□□□ -0.8
CAPN3-208ENST00000397204 IL25Q9H293 177 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 RWDD3Q9Y3V2 267 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 WDFY4Q6ZS81 3184 aa10.08□□□□□ -0.8
CAPN3-208ENST00000397204 BAZ2BQ9UIF8 2168 aaKnown RBP10.08□□□□□ -0.8
CAPN3-208ENST00000397204 MYH7BA7E2Y1 1941 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 E7EWF7 191 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 MEIS2O14770 477 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 DCXO43602 365 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 RPLP2P05387 115 aaKnown RBP10.07□□□□□ -0.8
CAPN3-208ENST00000397204 CFHP08603 1231 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 GNAQP50148 359 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 CSPP1Q1MSJ5 1256 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 CTC1Q2NKJ3 1217 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 USP17L6PQ6QN14 398 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 TMTC2Q8N394 836 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 SMARCC2Q8TAQ2 1214 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 CLP1Q92989 425 aaKnown RBP10.07□□□□□ -0.8
CAPN3-208ENST00000397204 GPRASP2Q96D09 838 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 MTA3Q9BTC8 594 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 SPZ1Q9BXG8 430 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 KCNH6Q9H252 994 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 SENP2Q9HC62 589 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 C5orf42Q9H799 3197 aa10.07□□□□□ -0.8
CAPN3-208ENST00000397204 PTPRSQ13332 1948 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 ZMYND10O75800 440 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 CHMLP26374 656 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 KIF5BP33176 963 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 TCF7P36402 384 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-208ENST00000397204 LTBRP36941 435 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 COPS2P61201 443 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 PTH1RQ03431 593 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 ZP2Q05996 745 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 LPIN1Q14693 890 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 NAALADL2Q58DX5 795 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 FAM43BQ6ZT52 329 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-208ENST00000397204 EP400NLQ6ZTU2 488 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 TRIM50Q86XT4 487 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 ADHFE1Q8IWW8 467 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 CTCFLQ8NI51 663 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-208ENST00000397204 PIBF1Q8WXW3 757 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 TNPO1Q92973 898 aaKnown RBP10.06□□□□□ -0.8
CAPN3-208ENST00000397204 UIMC1Q96RL1 719 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 PLVAPQ9BX97 442 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 SMARCAD1Q9H4L7 1026 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 PSTPIP2Q9H939 334 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 CLDND1Q9NY35 253 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 ERAP1Q9NZ08 941 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 SEC63Q9UGP8 760 aaKnown RBP10.06□□□□□ -0.8
CAPN3-208ENST00000397204 SQORQ9Y6N5 450 aa10.06□□□□□ -0.8
CAPN3-208ENST00000397204 GSTTP1A0A1W2PQM5 241 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 MBLAC1A4D2B0 266 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-208ENST00000397204 RRN3P2A6NIE6 340 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 DDX11L8A8MPP1 907 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 RBAK-RBAKDNI3L0D1 243 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 GRM6O15303 877 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 ATP9AO75110 1047 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 DDAH1O94760 285 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 LINC00271P0C7V0 271 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 GHRP10912 638 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 CTNNB1P35222 781 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 SP4Q02446 784 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 MGAT3Q09327 533 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 PPFIA1Q13136 1202 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 BTG3Q14201 252 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-208ENST00000397204 FBXO47Q5MNV8 452 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 TTC22Q5TAA0 569 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 IER5Q5VY09 327 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 RUFY4Q6ZNE9 571 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 KRI1Q8N9T8 703 aaKnown RBP10.05□□□□□ -0.8
CAPN3-208ENST00000397204 EXOC6Q8TAG9 804 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 GLG1Q92896 1179 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 MAP4K1Q92918 833 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 ZNF689Q96CS4 500 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-208ENST00000397204 PRR14Q9BWN1 585 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 TELO2Q9Y4R8 837 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 MICAL3Q7RTP6 2002 aa10.05□□□□□ -0.8
CAPN3-208ENST00000397204 MYH6P13533 1939 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 DGKIO75912 1065 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 KCNA2P16389 499 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 ITGB5P18084 799 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 ANTXR2P58335 489 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 HYAL1Q12794 435 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 ADAM15Q13444 863 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 SMAD2Q15796 467 aaKnown RBP10.04□□□□□ -0.8
CAPN3-208ENST00000397204 GRIK4Q16099 956 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 KMT5BQ4FZB7 885 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 MARCH8Q5T0T0 291 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 TSHZ1Q6ZSZ6 1077 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 MB21D2Q8IYB1 491 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-208ENST00000397204 ZNF654Q8IZM8 581 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 CRIPAKQ8N1N5 446 aa10.04□□□□□ -0.8
CAPN3-208ENST00000397204 RDH13Q8NBN7 331 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms