RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 PALD1Q9ULE6 856 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 CAV1Q03135 178 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 EP400NLQ6ZTU2 488 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 SZRD1Q7Z422 152 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 NCAPG2Q86XI2 1143 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 RHOT2Q8IXI1 618 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 EXT2Q93063 718 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 AMNQ9BXJ7 453 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 PARVGQ9HBI0 331 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 PPIP5K2O43314 1243 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 APOA1P02647 267 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 KIAA2013Q8IYS2 634 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 ABCF3Q9NUQ8 709 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 KPNA7A9QM74 516 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 TMCC1O94876 653 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 AARSP49588 968 aaKnown RBP eCLIP14.98□□□□□ -0.01
COL4A3-202ENST00000396578 EPHB1P54762 984 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 COPS2P61201 443 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 LRRC63Q05C16 580 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 ABCC4O15439 1325 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 MYO1CO00159 1063 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 SNX2O60749 519 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 CCDC85BQ15834 202 aaPredicted RBP14.98□□□□□ -0.01
COL4A3-202ENST00000396578 SIX6OS1Q8N1H7 587 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 GFM2Q969S9 779 aaKnown RBP14.98□□□□□ -0.01
COL4A3-202ENST00000396578 HACD3Q9P035 362 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 SLC8A2Q9UPR5 921 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 ZBTB12Q9Y330 459 aaPredicted RBP14.98□□□□□ -0.01
COL4A3-202ENST00000396578 KIF1CO43896 1103 aaKnown RBP14.98□□□□□ -0.01
COL4A3-202ENST00000396578 FGGP02679 453 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 KITP10721 976 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 RMDN2Q96LZ7 410 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 SAYSD1Q9NPB0 183 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 ARHGEF37A1IGU5 675 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 SMARCA1P28370 1054 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 MECOMQ03112 1051 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 TERF2Q15554 542 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 BEGAINQ9BUH8 593 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 ASPSCR1Q9BZE9 553 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 WDR11Q9BZH6 1224 aa14.98□□□□□ -0.01
COL4A3-202ENST00000396578 WDR17Q8IZU2 1322 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 INO80B-WBP1J3KQ70 363 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 TTLL1O95922 423 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 PAPOLAP51003 745 aaKnown RBP14.97□□□□□ -0.01
COL4A3-202ENST00000396578 MRPL28Q13084 256 aaKnown RBP14.97□□□□□ -0.01
COL4A3-202ENST00000396578 RARS2Q5T160 578 aaKnown RBP14.97□□□□□ -0.01
COL4A3-202ENST00000396578 C7orf31Q8N865 590 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 INO80BQ9C086 356 aaPredicted RBP14.97□□□□□ -0.01
COL4A3-202ENST00000396578 ZNF212Q9UDV6 495 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 ANP32DO95626 131 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 NFKBIAP25963 317 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 ARL4CP56559 192 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 EFTUD2Q15029 972 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL4A3-202ENST00000396578 ABCB5Q2M3G0 1257 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 NDE1Q9NXR1 346 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 DBNLQ9UJU6 430 aaKnown RBP14.97□□□□□ -0.01
COL4A3-202ENST00000396578 PSMA2P25787 234 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 MRPS15P82914 257 aaKnown RBP14.97□□□□□ -0.01
COL4A3-202ENST00000396578 IMPG1Q17R60 797 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 SLFN13Q68D06 897 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 GAS2L3Q86XJ1 694 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 RNF139Q8WU17 664 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 LRRC41Q15345 812 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 THOC1Q96FV9 657 aaKnown RBP14.97□□□□□ -0.01
COL4A3-202ENST00000396578 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL4A3-202ENST00000396578 LGR6Q9HBX8 967 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 FAM95CA0A1B0GW59 222 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 RPS8P62241 208 aaKnown RBP14.97□□□□□ -0.01
COL4A3-202ENST00000396578 ARHGEF25Q86VW2 580 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 SSH3Q8TE77 659 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 PCIF1Q9H4Z3 704 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 DONSONQ9NYP3 566 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 NPC1L1Q9UHC9 1359 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 RNF103-CHMP3A0A140T963 221 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 CFAP73A6NFT4 308 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 UBAP1LF5GYI3 381 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 KRT38O76015 456 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 STK32BQ9NY57 414 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 ADAM21Q9UKJ8 722 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 TEX14Q8IWB6 1497 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 GMNCA6NCL1 334 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 SURF1Q15526 300 aa14.97□□□□□ -0.01
COL4A3-202ENST00000396578 DNMT1P26358 1616 aaKnown RBP14.96□□□□□ -0.01
COL4A3-202ENST00000396578 ZNF18P17022 549 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 DDIT3P35638 169 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 PMS1P54277 932 aaKnown RBP14.96□□□□□ -0.01
COL4A3-202ENST00000396578 ZBTB38Q8NAP3 1195 aaPredicted RBP14.96□□□□□ -0.01
COL4A3-202ENST00000396578 ECT2Q9H8V3 914 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 GTSE1Q9NYZ3 720 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 ADA2Q9NZK5 511 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 PDCLQ13371 301 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 LSG1Q9H089 658 aaKnown RBP14.96□□□□□ -0.01
COL4A3-202ENST00000396578 SAMSN1Q9NSI8 373 aaKnown RBP14.96□□□□□ -0.01
COL4A3-202ENST00000396578 ZNF229Q9UJW7 825 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 MMP1P03956 469 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 OCM2P0CE71 109 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 OCMP0CE72 109 aaPredicted RBP14.96□□□□□ -0.01
COL4A3-202ENST00000396578 RANBP1P43487 201 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 PSMC1P62191 440 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms