RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 COASYQ13057 564 aa20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 CAMK1Q14012 370 aa20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 PDE12Q6L8Q7 609 aaKnown RBP20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 HFE2Q6ZVN8 426 aa20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 FAM49AQ9H0Q0 323 aaPredicted RBP20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 KCNH7Q9NS40 1196 aa20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 LRFN2Q9ULH4 789 aa20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 RBM8AQ9Y5S9 174 aaKnown RBP20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 SLC12A7Q9Y666 1083 aa20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 SH2B2O14492 632 aaPredicted RBP20.01■□□□□ 0.79
EXOSC3-202ENST00000396521 PLEKHA8P1O95397 391 aa20.01■□□□□ 0.79
EXOSC3-202ENST00000396521 ITGB1P05556 798 aa20.01■□□□□ 0.79
EXOSC3-202ENST00000396521 PDE4AP27815 886 aa20.01■□□□□ 0.79
EXOSC3-202ENST00000396521 STAT5BP51692 787 aa20.01■□□□□ 0.79
EXOSC3-202ENST00000396521 CLUL1Q15846 466 aa20.01■□□□□ 0.79
EXOSC3-202ENST00000396521 RTN4RL1Q86UN2 441 aaPredicted RBP20.01■□□□□ 0.79
EXOSC3-202ENST00000396521 SMRP1Q8NCR6 262 aa20.01■□□□□ 0.79
EXOSC3-202ENST00000396521 MXRA8Q9BRK3 442 aa20.01■□□□□ 0.79
EXOSC3-202ENST00000396521 MYL10Q9BUA6 226 aa20.01■□□□□ 0.79
EXOSC3-202ENST00000396521 GLT8D2Q9H1C3 349 aa20.01■□□□□ 0.79
EXOSC3-202ENST00000396521 PCDHB12Q9Y5F1 795 aa20.01■□□□□ 0.79
EXOSC3-202ENST00000396521 KRT76Q01546 638 aa20■□□□□ 0.79
EXOSC3-202ENST00000396521 SYNE3Q6ZMZ3 975 aa20■□□□□ 0.79
EXOSC3-202ENST00000396521 FANCBQ8NB91 859 aa20■□□□□ 0.79
EXOSC3-202ENST00000396521 KLHL23Q8NBE8 558 aa20■□□□□ 0.79
EXOSC3-202ENST00000396521 POF1BQ8WVV4 589 aa20■□□□□ 0.79
EXOSC3-202ENST00000396521 LINC01599Q8WXQ3 324 aa20■□□□□ 0.79
EXOSC3-202ENST00000396521 PCYT2Q99447 389 aa20■□□□□ 0.79
EXOSC3-202ENST00000396521 CDCA3Q99618 268 aaPredicted RBP20■□□□□ 0.79
EXOSC3-202ENST00000396521 MUTYHQ9UIF7 546 aa20■□□□□ 0.79
EXOSC3-202ENST00000396521 PCDHB7Q9Y5E2 793 aa20■□□□□ 0.79
EXOSC3-202ENST00000396521 NLRC5Q86WI3 1866 aa19.99■□□□□ 0.79
EXOSC3-202ENST00000396521 SARSP49591 514 aaKnown RBP19.99■□□□□ 0.79
EXOSC3-202ENST00000396521 ACTR2P61160 394 aa19.99■□□□□ 0.79
EXOSC3-202ENST00000396521 PLCB4Q15147 1175 aa19.99■□□□□ 0.79
EXOSC3-202ENST00000396521 CEP55Q53EZ4 464 aa19.99■□□□□ 0.79
EXOSC3-202ENST00000396521 PPP1R18Q6NYC8 613 aa19.99■□□□□ 0.79
EXOSC3-202ENST00000396521 YTHDC1Q96MU7 727 aaKnown RBP19.99■□□□□ 0.79
EXOSC3-202ENST00000396521 C1orf112Q9NSG2 853 aa19.99■□□□□ 0.79
EXOSC3-202ENST00000396521 PKD2L1Q9P0L9 805 aa19.99■□□□□ 0.79
EXOSC3-202ENST00000396521 hCG_1984214I3L0E3 225 aa19.98■□□□□ 0.79
EXOSC3-202ENST00000396521 HBP1O60381 514 aa19.98■□□□□ 0.79
EXOSC3-202ENST00000396521 ATG7O95352 703 aa19.98■□□□□ 0.79
EXOSC3-202ENST00000396521 GTF2F1P35269 517 aaKnown RBP eCLIP19.98■□□□□ 0.79
EXOSC3-202ENST00000396521 CBX2Q14781 532 aaPredicted RBP19.98■□□□□ 0.79
EXOSC3-202ENST00000396521 UBE2SQ16763 222 aa19.98■□□□□ 0.79
EXOSC3-202ENST00000396521 TMTC3Q6ZXV5 915 aa19.98■□□□□ 0.79
EXOSC3-202ENST00000396521 HEATR3Q7Z4Q2 680 aa19.98■□□□□ 0.79
EXOSC3-202ENST00000396521 SGMS1Q86VZ5 419 aa19.98■□□□□ 0.79
EXOSC3-202ENST00000396521 ZNF713Q8N859 430 aaPredicted RBP19.98■□□□□ 0.79
EXOSC3-202ENST00000396521 TLE6Q9H808 572 aa19.98■□□□□ 0.79
EXOSC3-202ENST00000396521 CLEC1BQ9P126 229 aa19.98■□□□□ 0.79
EXOSC3-202ENST00000396521 LOC730098B7Z3J9 87 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 RBAK-RBAKDNI3L0D1 243 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 GPR182O15218 404 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 LINC01565O15544 149 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 SRGAP2BP0DMP2 458 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 ATF7P17544 494 aaPredicted RBP19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 DNAJB1P25685 340 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 NRIP1P48552 1158 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 FAM160B1Q5W0V3 765 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 MTHFD1LQ6UB35 978 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 TRIM67Q6ZTA4 783 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 SLC24A5Q71RS6 500 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 NIPA1Q7RTP0 329 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 ZNF710Q8N1W2 664 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 RIC8AQ9NPQ8 531 aa19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 RBM28Q9NW13 759 aaKnown RBP19.97■□□□□ 0.79
EXOSC3-202ENST00000396521 COL1A2P08123 1366 aa19.96■□□□□ 0.79
EXOSC3-202ENST00000396521 IGKV6D-21A0A0A0MT36 114 aa19.96■□□□□ 0.79
EXOSC3-202ENST00000396521 MEIS1O00470 390 aa19.96■□□□□ 0.79
EXOSC3-202ENST00000396521 RPS6KA5O75582 802 aa19.96■□□□□ 0.79
EXOSC3-202ENST00000396521 NFX1Q12986 1120 aaKnown RBP19.96■□□□□ 0.79
EXOSC3-202ENST00000396521 AP3B2Q13367 1082 aa19.96■□□□□ 0.79
EXOSC3-202ENST00000396521 PAN2Q504Q3 1202 aaKnown RBP19.96■□□□□ 0.79
EXOSC3-202ENST00000396521 CMTR1Q8N1G2 835 aaKnown RBP19.96■□□□□ 0.79
EXOSC3-202ENST00000396521 MICAL1Q8TDZ2 1067 aa19.96■□□□□ 0.79
EXOSC3-202ENST00000396521 PHF7Q9BWX1 381 aaPredicted RBP19.96■□□□□ 0.79
EXOSC3-202ENST00000396521 RGS18Q9NS28 235 aa19.96■□□□□ 0.79
EXOSC3-202ENST00000396521 TRIOO75962 3097 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 DENND3A2RUS2 1198 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 KLRC1P26715 233 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 PTPN5P54829 565 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 TMEM62Q0P6H9 643 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 ZNF484Q5JVG2 852 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 MCTP2Q6DN12 878 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 SUGP1Q8IWZ8 645 aaKnown RBP19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 CCDC82Q8N4S0 544 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 ATP8B4Q8TF62 1192 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 PBXIP1Q96AQ6 731 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 IRF2BPLQ9H1B7 796 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 TMX1Q9H3N1 280 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 AGO4Q9HCK5 861 aaKnown RBP19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 TLR9Q9NR96 1032 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 LZTS1Q9Y250 596 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 ZNF318Q5VUA4 2279 aa19.95■□□□□ 0.78
EXOSC3-202ENST00000396521 TMEM221A6NGB7 291 aa19.94■□□□□ 0.78
EXOSC3-202ENST00000396521 M0R296 226 aa19.94■□□□□ 0.78
EXOSC3-202ENST00000396521 RXRAP19793 462 aa19.94■□□□□ 0.78
EXOSC3-202ENST00000396521 NAPAP54920 295 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms