RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 H2AFZP0C0S5 128 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 PPATQ06203 517 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 PTPAQ15257 358 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 H2AFVQ71UI9 128 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 TXNRD3Q86VQ6 643 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF70Q9UC06 446 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 PPP1R9AQ9ULJ8 1098 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SRCAPQ6ZRS2 3230 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 TAF1P21675 1872 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 MAST2Q6P0Q8 1798 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 COL5A3P25940 1745 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 A0A1B0GTH6 734 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 MYO1FO00160 1098 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SNHG28P0DPA3 235 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 PDE6CP51160 858 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 MYO1EQ12965 1108 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 ZYXQ15942 572 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 TRIM62Q9BVG3 475 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 IL25Q9H293 177 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SMCHD1A6NHR9 2005 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SCN7AQ01118 1682 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 A0A1W2PQJ5 194 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 MICALCLQ6ZW33 695 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 DYMQ7RTS9 669 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 GAS2L3Q86XJ1 694 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 CLIC6Q96NY7 704 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 KATNAL1Q9BW62 490 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 FAM124BQ9H5Z6 455 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 LRRC4BQ9NT99 713 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 UTP11Q9Y3A2 253 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 LY75O60449 1722 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 UBR3Q6ZT12 1888 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 TMEM191BP0C7N4 346 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 EZRP15311 586 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 RPS6KA1Q15418 735 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 ASIC2Q16515 512 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 COBLL1Q53SF7 1204 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SNRNP48Q6IEG0 339 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 C8orf74Q6P047 294 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 STRIP2Q9ULQ0 834 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 TNNC2P02585 160 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 RFC5P40937 340 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 Q4G0T1 1027 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SEL1L2Q5TEA6 688 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 PEX26Q7Z412 305 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 RNF146Q9NTX7 359 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 ERAP1Q9NZ08 941 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 MAPK8IP1Q9UQF2 711 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SYNGAP1Q96PV0 1343 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SLC16A3O15427 465 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 CHMP2AO43633 222 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 ZEB2O60315 1214 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 NDUFA10O95299 355 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 TNFAIP3P21580 790 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 CYP4A11Q02928 519 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 USP17L6PQ6QN14 398 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 MAP7D3Q8IWC1 876 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 COA7Q96BR5 231 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 NT5C1BQ96P26 610 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 CEP72Q9P209 647 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 MAN1B1Q9UKM7 699 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 ARAP2Q8WZ64 1704 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SERPING1P05155 500 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 NSFP46459 744 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 RHBDL3P58872 404 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 IFFO1Q0D2I5 559 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 BZW1Q7L1Q6 419 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 PARK7Q99497 189 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SPTLC3Q9NUV7 552 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 MKRN1Q9UHC7 482 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 AMFRQ9UKV5 643 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 RNF8O76064 485 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 ALDH1A1P00352 501 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 HOXD10P28358 340 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 TNFAIP2Q03169 654 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 FAM83BQ5T0W9 1011 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 IPO4Q8TEX9 1081 aaKnown RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 GJA10Q969M2 543 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 CCDC102AQ96A19 550 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 NUP205Q92621 2012 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 GDF11O95390 407 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 CETPP11597 493 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 CHRNA5P30532 468 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 RRAGAQ7L523 313 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 BBOF1Q8ND07 529 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 GRK7Q8WTQ7 553 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 TRERF1Q96PN7 1200 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 SLC39A2Q9NP94 309 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PLCB1Q9NQ66 1216 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 A0A0G2JLW4 131 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 DPYDQ12882 1025 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 MTMR3Q13615 1198 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 DCUN1D2Q6PH85 259 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 NCAPG2Q86XI2 1143 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 MICALL2Q8IY33 904 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 AIFM3Q96NN9 605 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 HOMER2Q9NSB8 354 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 GCNT4Q9P109 453 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 HACL1Q9UJ83 578 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PODXLO00592 558 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms