RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 UBIAD1Q9Y5Z9 338 aa18.19■□□□□ 0.5
SNCA-205ENST00000394991 IGSF9BQ9UPX0 1349 aa18.19■□□□□ 0.5
SNCA-205ENST00000394991 ERICH2A1L162 156 aa18.18■□□□□ 0.5
SNCA-205ENST00000394991 PER2O15055 1255 aa18.18■□□□□ 0.5
SNCA-205ENST00000394991 PPFIA3O75145 1194 aa18.18■□□□□ 0.5
SNCA-205ENST00000394991 ANTXR2P58335 489 aa18.18■□□□□ 0.5
SNCA-205ENST00000394991 PAK2Q13177 524 aa18.18■□□□□ 0.5
SNCA-205ENST00000394991 IER5Q5VY09 327 aa18.18■□□□□ 0.5
SNCA-205ENST00000394991 ATP8B4Q8TF62 1192 aa18.18■□□□□ 0.5
SNCA-205ENST00000394991 CDHR1Q96JP9 859 aa18.18■□□□□ 0.5
SNCA-205ENST00000394991 SPZ1Q9BXG8 430 aa18.18■□□□□ 0.5
SNCA-205ENST00000394991 TLE6Q9H808 572 aa18.18■□□□□ 0.5
SNCA-205ENST00000394991 HCSTQ9UBK5 93 aa18.18■□□□□ 0.5
SNCA-205ENST00000394991 PTPRZ1P23471 2315 aaPredicted RBP18.18■□□□□ 0.5
SNCA-205ENST00000394991 RRN3P2A6NIE6 340 aa18.17■□□□□ 0.5
SNCA-205ENST00000394991 GFRA3O60609 400 aa18.17■□□□□ 0.5
SNCA-205ENST00000394991 IGHDP01880 384 aa18.17■□□□□ 0.5
SNCA-205ENST00000394991 ATF7P17544 494 aaPredicted RBP18.17■□□□□ 0.5
SNCA-205ENST00000394991 PTH1RQ03431 593 aa18.17■□□□□ 0.5
SNCA-205ENST00000394991 CATIPQ7Z7H3 387 aa18.17■□□□□ 0.5
SNCA-205ENST00000394991 RRP36Q96EU6 259 aaKnown RBP18.17■□□□□ 0.5
SNCA-205ENST00000394991 MYL10Q9BUA6 226 aa18.17■□□□□ 0.5
SNCA-205ENST00000394991 CELF4Q9BZC1 486 aaKnown RBP18.17■□□□□ 0.5
SNCA-205ENST00000394991 PCDHA2Q9Y5H9 948 aa18.17■□□□□ 0.5
SNCA-205ENST00000394991 RIF1Q5UIP0 2472 aaKnown RBP18.17■□□□□ 0.5
SNCA-205ENST00000394991 FAM186AA6NE01 2351 aa18.16■□□□□ 0.5
SNCA-205ENST00000394991 E7EWF7 191 aa18.16■□□□□ 0.5
SNCA-205ENST00000394991 MGEA5O60502 916 aa18.16■□□□□ 0.5
SNCA-205ENST00000394991 RPLP2P05387 115 aaKnown RBP18.16■□□□□ 0.5
SNCA-205ENST00000394991 IBSPP21815 317 aaPredicted RBP18.16■□□□□ 0.5
SNCA-205ENST00000394991 MTMR1Q13613 665 aa18.16■□□□□ 0.5
SNCA-205ENST00000394991 UBE2SQ16763 222 aa18.16■□□□□ 0.5
SNCA-205ENST00000394991 DUSP6Q16828 381 aa18.16■□□□□ 0.5
SNCA-205ENST00000394991 TMEM266Q2M3C6 531 aa18.16■□□□□ 0.5
SNCA-205ENST00000394991 IGDCC4Q8TDY8 1250 aa18.16■□□□□ 0.5
SNCA-205ENST00000394991 LRFN2Q9ULH4 789 aa18.16■□□□□ 0.5
SNCA-205ENST00000394991 KDM3AQ9Y4C1 1321 aa18.16■□□□□ 0.5
SNCA-205ENST00000394991 M0QZ92 97 aa18.15■□□□□ 0.5
SNCA-205ENST00000394991 PLEKHA8P1O95397 391 aa18.15■□□□□ 0.5
SNCA-205ENST00000394991 AVPR2P30518 371 aa18.15■□□□□ 0.5
SNCA-205ENST00000394991 SARSP49591 514 aaKnown RBP18.15■□□□□ 0.5
SNCA-205ENST00000394991 ERVFC1P60507 584 aa18.15■□□□□ 0.5
SNCA-205ENST00000394991 UBE3AQ05086 875 aa18.15■□□□□ 0.5
SNCA-205ENST00000394991 PLCB4Q15147 1175 aa18.15■□□□□ 0.5
SNCA-205ENST00000394991 PTPN21Q16825 1174 aa18.15■□□□□ 0.5
SNCA-205ENST00000394991 RALYLQ86SE5 291 aaKnown RBP18.15■□□□□ 0.5
SNCA-205ENST00000394991 ZNF654Q8IZM8 581 aa18.15■□□□□ 0.5
SNCA-205ENST00000394991 NCOA7Q8NI08 942 aa18.15■□□□□ 0.5
SNCA-205ENST00000394991 RWDD1Q9H446 243 aaPredicted RBP18.15■□□□□ 0.5
SNCA-205ENST00000394991 JADE2Q9NQC1 790 aa18.15■□□□□ 0.5
SNCA-205ENST00000394991 TLR9Q9NR96 1032 aa18.15■□□□□ 0.5
SNCA-205ENST00000394991 TRPC6Q9Y210 931 aa18.15■□□□□ 0.5
SNCA-205ENST00000394991 U3KPZ7 1027 aaPredicted RBP18.15■□□□□ 0.5
SNCA-205ENST00000394991 WDR81Q562E7 1941 aa18.14■□□□□ 0.49
SNCA-205ENST00000394991 FSCN2O14926 492 aa18.14■□□□□ 0.49
SNCA-205ENST00000394991 FGF18O76093 207 aa18.14■□□□□ 0.49
SNCA-205ENST00000394991 PDGFBP01127 241 aaPredicted RBP18.14■□□□□ 0.49
SNCA-205ENST00000394991 KCNC3Q14003 757 aa18.14■□□□□ 0.49
SNCA-205ENST00000394991 SART3Q15020 963 aaKnown RBP18.14■□□□□ 0.49
SNCA-205ENST00000394991 MB21D2Q8IYB1 491 aaPredicted RBP18.14■□□□□ 0.49
SNCA-205ENST00000394991 SRBD1Q8N5C6 995 aaKnown RBP18.14■□□□□ 0.49
SNCA-205ENST00000394991 MICAL1Q8TDZ2 1067 aa18.14■□□□□ 0.49
SNCA-205ENST00000394991 NEK1Q96PY6 1258 aa18.14■□□□□ 0.49
SNCA-205ENST00000394991 MAP3K14Q99558 947 aa18.14■□□□□ 0.49
SNCA-205ENST00000394991 S1PR5Q9H228 398 aa18.14■□□□□ 0.49
SNCA-205ENST00000394991 PSTPIP2Q9H939 334 aa18.14■□□□□ 0.49
SNCA-205ENST00000394991 LY9Q9HBG7 655 aa18.14■□□□□ 0.49
SNCA-205ENST00000394991 ERVK-5Q9HDB9 667 aa18.14■□□□□ 0.49
SNCA-205ENST00000394991 JPH1Q9HDC5 661 aaPredicted RBP18.14■□□□□ 0.49
SNCA-205ENST00000394991 MYH9P35579 1960 aaKnown RBP18.13■□□□□ 0.49
SNCA-205ENST00000394991 TBKBP1A7MCY6 615 aa18.13■□□□□ 0.49
SNCA-205ENST00000394991 DDAH1O94760 285 aa18.13■□□□□ 0.49
SNCA-205ENST00000394991 GSPT1P15170 499 aaKnown RBP18.13■□□□□ 0.49
SNCA-205ENST00000394991 SMARCA1P28370 1054 aa18.13■□□□□ 0.49
SNCA-205ENST00000394991 KRT76Q01546 638 aa18.13■□□□□ 0.49
SNCA-205ENST00000394991 NFX1Q12986 1120 aaKnown RBP18.13■□□□□ 0.49
SNCA-205ENST00000394991 SPOUT1Q5T280 376 aaKnown RBP18.13■□□□□ 0.49
SNCA-205ENST00000394991 FAM102BQ5T8I3 360 aa18.13■□□□□ 0.49
SNCA-205ENST00000394991 SYCE2Q6PIF2 218 aa18.13■□□□□ 0.49
SNCA-205ENST00000394991 CMTR1Q8N1G2 835 aaKnown RBP18.13■□□□□ 0.49
SNCA-205ENST00000394991 COLGALT1Q8NBJ5 622 aa18.13■□□□□ 0.49
SNCA-205ENST00000394991 CTCFLQ8NI51 663 aaPredicted RBP18.13■□□□□ 0.49
SNCA-205ENST00000394991 CDCA3Q99618 268 aaPredicted RBP18.13■□□□□ 0.49
SNCA-205ENST00000394991 CDHR5Q9HBB8 845 aa18.13■□□□□ 0.49
SNCA-205ENST00000394991 SLC9A2Q9UBY0 812 aa18.13■□□□□ 0.49
SNCA-205ENST00000394991 SEC63Q9UGP8 760 aaKnown RBP18.13■□□□□ 0.49
SNCA-205ENST00000394991 PCDHB12Q9Y5F1 795 aa18.13■□□□□ 0.49
SNCA-205ENST00000394991 SMIM35A0A1B0GVV1 85 aa18.12■□□□□ 0.49
SNCA-205ENST00000394991 ACTR2P61160 394 aa18.12■□□□□ 0.49
SNCA-205ENST00000394991 APOBRQ0VD83 1088 aa18.12■□□□□ 0.49
SNCA-205ENST00000394991 MTHFD1LQ6UB35 978 aa18.12■□□□□ 0.49
SNCA-205ENST00000394991 TMEM40Q8WWA1 233 aa18.12■□□□□ 0.49
SNCA-205ENST00000394991 ATOH1Q92858 354 aaPredicted RBP18.12■□□□□ 0.49
SNCA-205ENST00000394991 APOL5Q9BWW9 433 aa18.12■□□□□ 0.49
SNCA-205ENST00000394991 AZI2Q9H6S1 392 aa18.12■□□□□ 0.49
SNCA-205ENST00000394991 CWH43Q9H720 699 aa18.12■□□□□ 0.49
SNCA-205ENST00000394991 PCDHA6Q9UN73 950 aa18.12■□□□□ 0.49
SNCA-205ENST00000394991 NOC2LQ9Y3T9 749 aaKnown RBP18.12■□□□□ 0.49
SNCA-205ENST00000394991 PCDHB7Q9Y5E2 793 aa18.12■□□□□ 0.49
SNCA-205ENST00000394991 PCDHA8Q9Y5H6 950 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms