RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 MRPS15P82914 257 aaKnown RBP13.14□□□□□ -0.31
SIN3A-202ENST00000394947 DR1Q01658 176 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 LRRC36Q1X8D7 754 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 THEMIS2Q5TEJ8 643 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 PBXIP1Q96AQ6 731 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 ADORA1P30542 326 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 KCTD2Q14681 263 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 LRRC14Q15048 493 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 BTNL9Q6UXG8 535 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 MCF2L2Q86YR7 1114 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 DMC1Q14565 340 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 CYTH1Q15438 398 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 LRRC8EQ6NSJ5 796 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 CCDC51Q96ER9 411 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 SNX5Q9Y5X3 404 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 TIAM1Q13009 1591 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 HSPA6P17066 643 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 PSMC5P62195 406 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 CYP27A1Q02318 531 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 AP1B1Q10567 949 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 C11orf57Q6ZUT1 292 aaPredicted RBP13.14□□□□□ -0.31
SIN3A-202ENST00000394947 ADNPQ9H2P0 1102 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 CHCHD3Q9NX63 227 aaKnown RBP13.14□□□□□ -0.31
SIN3A-202ENST00000394947 LRRC74AQ0VAA2 488 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 COBLL1Q53SF7 1204 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 TAS2R42Q7RTR8 314 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 SYT2Q8N9I0 419 aaPredicted RBP13.14□□□□□ -0.31
SIN3A-202ENST00000394947 C14orf93Q9H972 538 aaKnown RBP13.14□□□□□ -0.31
SIN3A-202ENST00000394947 PLAAQ9Y263 795 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 NCOA1Q15788 1441 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 ABCC1P33527 1531 aa13.14□□□□□ -0.31
SIN3A-202ENST00000394947 RASGRF2O14827 1237 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 MRPL28Q13084 256 aaKnown RBP13.13□□□□□ -0.31
SIN3A-202ENST00000394947 SPATA1Q5VX52 437 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 RETREG2Q8NC44 543 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 KLHL8Q9P2G9 620 aaPredicted RBP13.13□□□□□ -0.31
SIN3A-202ENST00000394947 SUN2Q9UH99 717 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 AURKCQ9UQB9 309 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 PCDHA13Q9Y5I0 950 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 ARIH2O95376 493 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 MOCS2O96007 188 aaPredicted RBP13.13□□□□□ -0.31
SIN3A-202ENST00000394947 ALDH1B1P30837 517 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 EIF4A3P38919 411 aaKnown RBP13.13□□□□□ -0.31
SIN3A-202ENST00000394947 NBPF20Q3BBV1 942 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 PARP10Q53GL7 1025 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 RNF103-CHMP3A0A140T963 221 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 SKIP12755 728 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 SLC27A3Q5K4L6 730 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 ACCSQ96QU6 501 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 GEMIN8Q9NWZ8 242 aaKnown RBP13.13□□□□□ -0.31
SIN3A-202ENST00000394947 C1orf131Q8NDD1 294 aaKnown RBP13.13□□□□□ -0.31
SIN3A-202ENST00000394947 STAT2P52630 851 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
SIN3A-202ENST00000394947 NUP93Q8N1F7 819 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 ULK4Q96C45 1275 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 NPATQ14207 1427 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 KIF14Q15058 1648 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 RALGAPBQ86X10 1494 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 SUPT3HB4E1H0 165 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 KCNQ3O43525 872 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 CCND2P30279 289 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 NEK2P51955 445 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 PLEKHM3Q6ZWE6 761 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 LARP4BQ92615 738 aaKnown RBP13.13□□□□□ -0.31
SIN3A-202ENST00000394947 DBNLQ9UJU6 430 aaKnown RBP13.13□□□□□ -0.31
SIN3A-202ENST00000394947 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
SIN3A-202ENST00000394947 YTHDC2Q9H6S0 1430 aaKnown RBP13.12□□□□□ -0.31
SIN3A-202ENST00000394947 MAPK13O15264 365 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 C11orf96Q7Z7L8 435 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 MIS12Q9H081 205 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 V9GYQ6 96 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 NESP48681 1621 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 PRXQ9BXM0 1461 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 CCDC142Q17RM4 750 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 SLC7A3Q8WY07 619 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 TAC1P20366 129 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 ZNF445P59923 1031 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 RPS6P62753 249 aaKnown RBP13.12□□□□□ -0.31
SIN3A-202ENST00000394947 DPCR1Q3MIW9 517 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 TRIM42Q8IWZ5 723 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 EFCAB13Q8IY85 973 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 PITPNM3Q9BZ71 974 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 ZFP69BQ9UJL9 534 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 PGRMC1O00264 195 aaKnown RBP13.12□□□□□ -0.31
SIN3A-202ENST00000394947 KRT31Q15323 416 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 PIGSQ96S52 555 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 MAN1B1Q9UKM7 699 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 NR1D1P20393 614 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 INPP5DQ92835 1189 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 FAM161BQ96MY7 647 aa13.12□□□□□ -0.31
SIN3A-202ENST00000394947 RPF1Q9H9Y2 349 aaKnown RBP13.12□□□□□ -0.31
SIN3A-202ENST00000394947 COPEO14579 308 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 MED7O43513 233 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 RAD17O75943 681 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 EPHB4P54760 987 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 THNSL1Q8IYQ7 743 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 TBCKQ8TEA7 893 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 PIGOQ8TEQ8 1089 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 CYP2D7A0A087X1C5 515 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms