RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 AARS2Q5JTZ9 985 aaKnown RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 C20orf194Q5TEA3 1177 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 DTX3LQ8TDB6 740 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 SPATA16Q9BXB7 569 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 NBPF26B4DH59 902 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 RALBP11234 206 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 GUCY2FP51841 1108 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 RWDD4Q6NW29 188 aaKnown RBP7.96□□□□□ -1.13
SYNE2-205ENST00000394768 TTC30AQ86WT1 665 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 FANCBQ8NB91 859 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 C2orf40Q9H1Z8 148 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 SPATS2LQ9NUQ6 558 aaKnown RBP7.96□□□□□ -1.13
SYNE2-205ENST00000394768 CAPN11Q9UMQ6 739 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 POLIQ9UNA4 740 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 SHROOM2Q13796 1616 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 E7EWF7 191 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 ASNSP08243 561 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 FDX1P10109 184 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 BTDP43251 543 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 POLR2FP61218 127 aaKnown RBP7.96□□□□□ -1.13
SYNE2-205ENST00000394768 TRMT10CQ7L0Y3 403 aaKnown RBP7.96□□□□□ -1.13
SYNE2-205ENST00000394768 TNIP2Q8NFZ5 429 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 GTF3C2Q8WUA4 911 aaPredicted RBP7.96□□□□□ -1.13
SYNE2-205ENST00000394768 PPP1R13BQ96KQ4 1090 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 PSMB7Q99436 277 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 PTPN22Q9Y2R2 807 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 POC1B-GALNT4F8VUJ3 575 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 AARSP49588 968 aaKnown RBP eCLIP7.96□□□□□ -1.13
SYNE2-205ENST00000394768 LAMC2Q13753 1193 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 C8orf58Q8NAV2 365 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 MAGOHBQ96A72 148 aaKnown RBP7.96□□□□□ -1.13
SYNE2-205ENST00000394768 PI4KBQ9UBF8 816 aa7.96□□□□□ -1.13
SYNE2-205ENST00000394768 SNTNA6NMZ2 147 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 TCP10L2B9ZVM9 353 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 HLA-DPA1P20036 260 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 OAS2P29728 719 aaKnown RBP7.96□□□□□ -1.14
SYNE2-205ENST00000394768 RANBP1P43487 201 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 ORC2Q13416 577 aaPredicted RBP7.96□□□□□ -1.14
SYNE2-205ENST00000394768 TJAP1Q5JTD0 557 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 SPATA1Q5VX52 437 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 MIGA2Q7L4E1 593 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 BEST2Q8NFU1 509 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 HOXC10Q9NYD6 342 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 PALD1Q9ULE6 856 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 DNAJC6O75061 913 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 RALAP11233 206 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 Q3C1V9 767 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 MXD3Q9BW11 206 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 ASNSD1Q9NWL6 643 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 HACD3Q9P035 362 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 G3BP2Q9UN86 482 aaKnown RBP7.96□□□□□ -1.14
SYNE2-205ENST00000394768 SYNMO15061 1565 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 APOA1P02647 267 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 CTDSPL2Q05D32 466 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 NAALADL2Q58DX5 795 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 APOBEC3FQ8IUX4 373 aaKnown RBP7.96□□□□□ -1.14
SYNE2-205ENST00000394768 MOSPD1Q9UJG1 213 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 PIK3R2O00459 728 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 MAPK13O15264 365 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 SLC9A1P19634 815 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 BANK1Q8NDB2 785 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 CABLES1Q8TDN4 633 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 HEXIM2Q96MH2 286 aaKnown RBP7.96□□□□□ -1.14
SYNE2-205ENST00000394768 CAPN7Q9Y6W3 813 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 MAP4P27816 1152 aaKnown RBP7.96□□□□□ -1.14
SYNE2-205ENST00000394768 ST8SIA6P61647 398 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 TAP1Q03518 808 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 LRRC63Q05C16 580 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 UBE3CQ15386 1083 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 UIMC1Q96RL1 719 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 LSM7Q9UK45 103 aaKnown RBP7.96□□□□□ -1.14
SYNE2-205ENST00000394768 PCDHA4Q9UN74 947 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 ATP10AO60312 1499 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 K7ERI5 159 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 ATP8B1O43520 1251 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 HSPA4LO95757 839 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 KCNA6P17658 529 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 COPS2P61201 443 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 SNX17Q15036 470 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 SERPINB13Q9UIV8 391 aa7.96□□□□□ -1.14
SYNE2-205ENST00000394768 TPX2Q9ULW0 747 aaKnown RBP7.96□□□□□ -1.14
SYNE2-205ENST00000394768 TAF5LO75529 589 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 AP3M2P53677 418 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 TTLL4Q14679 1199 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 KLHDC4Q8TBB5 520 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 DCUN1D1Q96GG9 259 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 TSPOAP1O95153 1857 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 CHUKO15111 745 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 TOM1L1O75674 476 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 CLTAP09496 248 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 C4BPBP20851 252 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 C6orf118Q5T5N4 469 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 PDXDC2PQ6P474 469 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 KIAA0825Q8IV33 1275 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 FMO2Q99518 471 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 LBHD1Q9BQE6 289 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-205ENST00000394768 FAM135BQ49AJ0 1406 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 BMP3P12645 472 aa7.95□□□□□ -1.14
SYNE2-205ENST00000394768 MXI1P50539 228 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms