RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 PSMD2Q13200 908 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 KRT71Q3SY84 523 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 SPATA21Q7Z572 469 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 P2RX5Q93086 422 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 PSMB7Q99436 277 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 GORASP1Q9BQQ3 440 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 WDR35Q9P2L0 1181 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 CHD4Q14839 1912 aa23.73■■□□□ 1.39
CLDND1-202ENST00000394180 MMEP08473 750 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 PLEKP08567 350 aaPredicted RBP23.72■■□□□ 1.39
CLDND1-202ENST00000394180 MCAMP43121 646 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 PDE6CP51160 858 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 COPS2P61201 443 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 PTGDRQ13258 359 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 CUL3Q13618 768 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 SESTD1Q86VW0 696 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 FANCBQ8NB91 859 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 FAM81AQ8TBF8 368 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 SH3TC2Q8TF17 1288 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 TRAPPC9Q96Q05 1148 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 CUEDC2Q9H467 287 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 DENND2AQ9ULE3 1009 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 MYH7BA7E2Y1 1941 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 MYH6P13533 1939 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 MSH2P43246 934 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 MTIF2P46199 727 aaKnown RBP23.72■■□□□ 1.39
CLDND1-202ENST00000394180 GYG1P46976 350 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 ASRGL1Q7L266 308 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 RBM12BQ8IXT5 1001 aaKnown RBP23.72■■□□□ 1.39
CLDND1-202ENST00000394180 STAG2Q8N3U4 1231 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 UBLCP1Q8WVY7 318 aaPredicted RBP23.72■■□□□ 1.39
CLDND1-202ENST00000394180 TEKT4Q8WW24 435 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 STAMQ92783 540 aa23.72■■□□□ 1.39
CLDND1-202ENST00000394180 RAB3IPQ96QF0 476 aaPredicted RBP23.72■■□□□ 1.39
CLDND1-202ENST00000394180 TULP1O00294 542 aaPredicted RBP23.71■■□□□ 1.39
CLDND1-202ENST00000394180 PRPF3O43395 683 aaKnown RBP23.71■■□□□ 1.39
CLDND1-202ENST00000394180 KLRC4O43908 158 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 BBOX1O75936 387 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 RNF8O76064 485 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 UBE4AQ14139 1066 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 WTAPQ15007 396 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 OR2W6PQ8NHA6 318 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 TAF4BQ92750 862 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 MASTLQ96GX5 879 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 ANKRD2Q9GZV1 360 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 ECT2Q9H8V3 914 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.71■■□□□ 1.39
CLDND1-202ENST00000394180 AGAP1Q9UPQ3 857 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 RPS6KL1Q9Y6S9 549 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 DPPA5A6NC42 116 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 EVI5O60447 810 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 ATP6V1C1P21283 382 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 MXRA7P84157 204 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 ERICH1Q86X53 443 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 NKX2-3Q8TAU0 364 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 KLHL29Q96CT2 875 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 GPR101Q96P66 508 aaPredicted RBP23.71■■□□□ 1.39
CLDND1-202ENST00000394180 TXLNGYQ9BZA5 131 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 STMN4Q9H169 189 aaPredicted RBP23.71■■□□□ 1.39
CLDND1-202ENST00000394180 ADAM22Q9P0K1 906 aa23.71■■□□□ 1.39
CLDND1-202ENST00000394180 H0YIN7 160 aa23.7■■□□□ 1.38
CLDND1-202ENST00000394180 SNX3O60493 162 aa23.7■■□□□ 1.38
CLDND1-202ENST00000394180 HIP1RO75146 1068 aa23.7■■□□□ 1.38
CLDND1-202ENST00000394180 GNAZP19086 355 aa23.7■■□□□ 1.38
CLDND1-202ENST00000394180 ZAP70P43403 619 aa23.7■■□□□ 1.38
CLDND1-202ENST00000394180 GPSM2P81274 684 aa23.7■■□□□ 1.38
CLDND1-202ENST00000394180 B4GALNT2Q8NHY0 566 aa23.7■■□□□ 1.38
CLDND1-202ENST00000394180 INCENPQ9NQS7 918 aa23.7■■□□□ 1.38
CLDND1-202ENST00000394180 ATP8B3O60423 1300 aa23.7■■□□□ 1.38
CLDND1-202ENST00000394180 ARAP2Q8WZ64 1704 aa23.7■■□□□ 1.38
CLDND1-202ENST00000394180 IGF2BP3O00425 579 aaKnown RBP eCLIP23.69■■□□□ 1.38
CLDND1-202ENST00000394180 PPEF1O14829 653 aaPredicted RBP23.69■■□□□ 1.38
CLDND1-202ENST00000394180 CHN1P15882 459 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 STAT6P42226 847 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 KLK7P49862 253 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 KCNJ2P63252 427 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 AKNAD1Q5T1N1 836 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 TXNRD3Q86VQ6 643 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 RPL26L1Q9UNX3 145 aaKnown RBP23.69■■□□□ 1.38
CLDND1-202ENST00000394180 ZNF804BA4D1E1 1349 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 MYH2Q9UKX2 1941 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 CCDC169A6NNP5 214 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 PALMO75781 387 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 GSTA2P09210 222 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 ANO7Q6IWH7 933 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 PDXDC1Q6P996 788 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 ATL2Q8NHH9 583 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 EPAS1Q99814 870 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 TMEM109Q9BVC6 243 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 MTFR1LQ9H019 292 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 VCXQ9H320 206 aa23.69■■□□□ 1.38
CLDND1-202ENST00000394180 UBOX5O94941 541 aa23.68■■□□□ 1.38
CLDND1-202ENST00000394180 FGFR1OPO95684 399 aaKnown RBP23.68■■□□□ 1.38
CLDND1-202ENST00000394180 ACADSP16219 412 aa23.68■■□□□ 1.38
CLDND1-202ENST00000394180 RASSF7Q02833 373 aa23.68■■□□□ 1.38
CLDND1-202ENST00000394180 PARP6Q2NL67 630 aa23.68■■□□□ 1.38
CLDND1-202ENST00000394180 FOXR2Q6PJQ5 311 aa23.68■■□□□ 1.38
CLDND1-202ENST00000394180 LRRC34Q8IZ02 419 aa23.68■■□□□ 1.38
CLDND1-202ENST00000394180 DISC1Q9NRI5 854 aa23.68■■□□□ 1.38
CLDND1-202ENST00000394180 USP15Q9Y4E8 981 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms