RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 KIFC2Q96AC6 838 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 SCYL1Q96KG9 808 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 FAM126AQ9BYI3 521 aaPredicted RBP6.6□□□□□ -1.35
CASC3-202ENST00000394114 ZNF341Q9BYN7 854 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 CBX8Q9HC52 389 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 GPRC5DQ9NZD1 345 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 PHF20L1A8MW92 1017 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 ERVH48-1M5A8F1 160 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 PDPK1O15530 556 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 ASNSP08243 561 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 AFMP43652 599 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 IRX3P78415 501 aaPredicted RBP6.6□□□□□ -1.35
CASC3-202ENST00000394114 GPR162Q16538 588 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 STX1AQ16623 288 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 DDR2Q16832 855 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 DPCR1Q3MIW9 517 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 GALNT17Q6IS24 598 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 CCDC174Q6PII3 467 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 KRBA2Q6ZNG9 492 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 KRT25Q7Z3Z0 450 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 GPC2Q8N158 579 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 ZNF511Q8NB15 262 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 ZNF296Q8WUU4 475 aaPredicted RBP6.6□□□□□ -1.35
CASC3-202ENST00000394114 CPLX3Q8WVH0 158 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 ZKSCAN4Q969J2 545 aaPredicted RBP6.6□□□□□ -1.35
CASC3-202ENST00000394114 GMCL1Q96IK5 515 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 SHDQ96IW2 340 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 PLIN2Q99541 437 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 SPSB2Q99619 263 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 PSTPIP2Q9H939 334 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 TMX2Q9Y320 296 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 PCDHB3Q9Y5E6 796 aa6.6□□□□□ -1.35
CASC3-202ENST00000394114 AP5Z1O43299 807 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 TDP2O95551 362 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 STAT2P52630 851 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 EPHB1P54762 984 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 RAB15P59190 212 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 PCNX4Q63HM2 1172 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 NXPE4Q6UWF7 544 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 NEK8Q86SG6 692 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 SAMD3Q8N6K7 520 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 C4orf32Q8N8J7 132 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 GPR152Q8TDT2 470 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 CUL5Q93034 780 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 GJA10Q969M2 543 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 FERMT2Q96AC1 680 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 KCTD15Q96SI1 283 aaPredicted RBP6.59□□□□□ -1.35
CASC3-202ENST00000394114 ESYT2A0FGR8 921 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 SMAD7O15105 426 aaKnown RBP6.59□□□□□ -1.35
CASC3-202ENST00000394114 BMP15O95972 392 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 HOXA13P31271 388 aaPredicted RBP6.59□□□□□ -1.35
CASC3-202ENST00000394114 WNT7BP56706 349 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 DHX8Q14562 1220 aaKnown RBP6.59□□□□□ -1.35
CASC3-202ENST00000394114 TCEA2Q15560 299 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 FBXO11Q86XK2 927 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 RASSF8Q8NHQ8 419 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 MTMR8Q96EF0 704 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 IFT43Q96FT9 208 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 LRCH3Q96II8 777 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 WRNIP1Q96S55 665 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 VCPKMTQ9H867 229 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 RIC8AQ9NPQ8 531 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 PLAAQ9Y263 795 aa6.59□□□□□ -1.35
CASC3-202ENST00000394114 FAM237AA0A1B0GTK4 181 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 hCG_1984214I3L0E3 225 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 SLC37A4O43826 429 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 NEMFO60524 1076 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 ADCY5O95622 1261 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 LDHAP00338 332 aaKnown RBP6.58□□□□□ -1.36
CASC3-202ENST00000394114 RPLP1P05386 114 aaKnown RBP6.58□□□□□ -1.36
CASC3-202ENST00000394114 MRPL12P52815 198 aaKnown RBP6.58□□□□□ -1.36
CASC3-202ENST00000394114 SMTNP53814 917 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 CCDC173Q0VFZ6 552 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 FOXD4Q12950 439 aaPredicted RBP6.58□□□□□ -1.36
CASC3-202ENST00000394114 KARSQ15046 597 aaKnown RBP6.58□□□□□ -1.36
CASC3-202ENST00000394114 DTHD1Q6ZMT9 781 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 ZNF713Q8N859 430 aaPredicted RBP6.58□□□□□ -1.36
CASC3-202ENST00000394114 TMEM74Q96NL1 305 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 P2RX7Q99572 595 aaKnown RBP6.58□□□□□ -1.36
CASC3-202ENST00000394114 AMNQ9BXJ7 453 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 ANO10Q9NW15 660 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 PCDHA5Q9Y5H7 936 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 BRCA2P51587 3418 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 POTEB2H3BUK9 544 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 EDIL3O43854 480 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 TXKP42681 527 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 POSTNQ15063 836 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 INTS6LQ5JSJ4 861 aaKnown RBP6.58□□□□□ -1.36
CASC3-202ENST00000394114 RELL1Q8IUW5 271 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 SYNPOQ8N3V7 929 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 AOPEPQ8N6M6 819 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 THAP3Q8WTV1 239 aaPredicted RBP6.58□□□□□ -1.36
CASC3-202ENST00000394114 TBC1D5Q92609 795 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 TRIM44Q96DX7 344 aaPredicted RBP6.58□□□□□ -1.36
CASC3-202ENST00000394114 TIGD1Q96MW7 591 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 SRRTQ9BXP5 876 aaKnown RBP6.58□□□□□ -1.36
CASC3-202ENST00000394114 ARNT2Q9HBZ2 717 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 VPS9D1Q9Y2B5 631 aa6.58□□□□□ -1.36
CASC3-202ENST00000394114 BECN2A8MW95 431 aa6.57□□□□□ -1.36
CASC3-202ENST00000394114 EML1O00423 815 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms