RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 LOC100289279A0A1B0GTE1 492 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 CCDC194A0A1B0GVG4 234 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 PI4KAP2A4QPH2 592 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 NPHP1O15259 732 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 RFPL3O75679 317 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 CYP11A1P05108 521 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 SRGNP10124 158 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 LIG1P18858 919 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 PLCG1P19174 1290 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 KCNJ4P48050 445 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 EXOSC10Q01780 885 aaKnown RBP6.4□□□□□ -1.38
NPM1-203ENST00000393820 NCBP1Q09161 790 aaKnown RBP6.4□□□□□ -1.38
NPM1-203ENST00000393820 PABPC4Q13310 644 aaKnown RBP eCLIP6.4□□□□□ -1.382e-9■□□□□ 9.3
NPM1-203ENST00000393820 POU4F3Q15319 338 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 FOXB2Q5VYV0 432 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 PRR5LQ6MZQ0 368 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 CYFIP1Q7L576 1253 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 LUZP1Q86V48 1076 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 FMNL3Q8IVF7 1028 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 PI4KAP1Q8N8J0 262 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 ZNF622Q969S3 477 aaKnown RBP eCLIP6.4□□□□□ -1.381e-21■□□□□ 9.2
NPM1-203ENST00000393820 LENG1Q96BZ8 264 aaPredicted RBP6.4□□□□□ -1.38
NPM1-203ENST00000393820 WDR89Q96FK6 387 aaPredicted RBP6.4□□□□□ -1.38
NPM1-203ENST00000393820 CEP89Q96ST8 783 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 LLPHQ9BRT6 129 aaKnown RBP6.4□□□□□ -1.38
NPM1-203ENST00000393820 KRTAP4-9Q9BYQ8 210 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 PCMTD2Q9NV79 361 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 CLIP2Q9UDT6 1046 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 ZNF214Q9UL59 606 aaPredicted RBP6.4□□□□□ -1.38
NPM1-203ENST00000393820 UTYO14607 1347 aa6.4□□□□□ -1.38
NPM1-203ENST00000393820 ARID1BQ8NFD5 2236 aaPredicted RBP6.4□□□□□ -1.38
NPM1-203ENST00000393820 CCDC163A0A0D9SF12 145 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 GOLGA6L19H0YKK7 550 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 PDE8AO60658 829 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 CAMTA2O94983 1202 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 SNRPA1P09661 255 aaKnown RBP6.4□□□□□ -1.39
NPM1-203ENST00000393820 CPA1P15085 419 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 NPR1P16066 1061 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 ALDH1B1P30837 517 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 IREB2P48200 963 aaKnown RBP6.4□□□□□ -1.39
NPM1-203ENST00000393820 SLC7A5Q01650 507 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 PDE4BQ07343 736 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 G3BP1Q13283 466 aaKnown RBP eCLIP6.4□□□□□ -1.39
NPM1-203ENST00000393820 IQCB1Q15051 598 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 CAMK4Q16566 473 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 TPD52L1Q16890 204 aaPredicted RBP6.4□□□□□ -1.39
NPM1-203ENST00000393820 TBC1D9BQ66K14 1250 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 KSR2Q6VAB6 950 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 CDC37L1Q7L3B6 337 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 RNF180Q86T96 592 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 LRRC8AQ8IWT6 810 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 RTKN2Q8IZC4 609 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 NECAB1Q8N987 351 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 KISS1RQ969F8 398 aaPredicted RBP6.4□□□□□ -1.39
NPM1-203ENST00000393820 SGSM3Q96HU1 749 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 EXOC2Q96KP1 924 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 CORO1BQ9BR76 489 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 CAAP1Q9H8G2 361 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 NCOA5Q9HCD5 579 aaKnown RBP6.4□□□□□ -1.39
NPM1-203ENST00000393820 PRDM10Q9NQV6 1147 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 C9orf78Q9NZ63 289 aaPredicted RBP6.4□□□□□ -1.39
NPM1-203ENST00000393820 RCOR1Q9UKL0 485 aa6.4□□□□□ -1.39
NPM1-203ENST00000393820 FAM86C2PA6NEL3 165 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 ZNF862O60290 1169 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 EIF4EBP3O60516 100 aaPredicted RBP6.39□□□□□ -1.39
NPM1-203ENST00000393820 U2AF2P26368 475 aaKnown RBP eCLIP6.39□□□□□ -1.392e-8■□□□□ 9.2
NPM1-203ENST00000393820 KCNJ6P48051 423 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 IRAK1P51617 712 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 PRELPP51888 382 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 GSDMDP57764 484 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 TOB2Q14106 344 aaPredicted RBP6.39□□□□□ -1.39
NPM1-203ENST00000393820 PTPN14Q15678 1187 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 BRDTQ58F21 947 aaPredicted RBP6.39□□□□□ -1.39
NPM1-203ENST00000393820 NAA16Q6N069 864 aaPredicted RBP6.39□□□□□ -1.39
NPM1-203ENST00000393820 AACSQ86V21 672 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 PNMA8AQ86V59 439 aaPredicted RBP6.39□□□□□ -1.39
NPM1-203ENST00000393820 LDHDQ86WU2 507 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 NBPF5PQ86XG9 351 aaPredicted RBP6.39□□□□□ -1.39
NPM1-203ENST00000393820 ZNF397Q8NF99 534 aaPredicted RBP6.39□□□□□ -1.39
NPM1-203ENST00000393820 LINS1Q8NG48 757 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 CACTINQ8WUQ7 758 aaKnown RBP6.39□□□□□ -1.39
NPM1-203ENST00000393820 ERO1AQ96HE7 468 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 PGBD1Q96JS3 809 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 ARHGEF4Q9NR80 690 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 FAM53CQ9NYF3 392 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 IMPACTQ9P2X3 320 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 KLHL3Q9UH77 587 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 ADAM30Q9UKF2 790 aa6.39□□□□□ -1.39
NPM1-203ENST00000393820 SCN7AQ01118 1682 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 RFX7Q2KHR2 1363 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 DICER1Q9UPY3 1922 aaKnown RBP6.38□□□□□ -1.39
NPM1-203ENST00000393820 FER1L6Q2WGJ9 1857 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 GSG1L2A8MUP6 293 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 F8W735 103 aaPredicted RBP6.38□□□□□ -1.39
NPM1-203ENST00000393820 DDX58O95786 925 aaKnown RBP6.38□□□□□ -1.39
NPM1-203ENST00000393820 EIF2S2P20042 333 aaKnown RBP6.38□□□□□ -1.39
NPM1-203ENST00000393820 NOS3P29474 1203 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 RESTQ13127 1097 aa6.38□□□□□ -1.39
NPM1-203ENST00000393820 NMIQ13287 307 aaPredicted RBP6.38□□□□□ -1.39
NPM1-203ENST00000393820 STX1AQ16623 288 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms