RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 BARX2Q9UMQ3 279 aaPredicted RBP22.78■■□□□ 1.24
POLR2J-202ENST00000393794 PCDHGC5Q9Y5F6 944 aa22.78■■□□□ 1.24
POLR2J-202ENST00000393794 TRPV2Q9Y5S1 764 aa22.78■■□□□ 1.24
POLR2J-202ENST00000393794 E7EWF7 191 aa22.77■■□□□ 1.24
POLR2J-202ENST00000393794 CSPG5O95196 566 aa22.77■■□□□ 1.24
POLR2J-202ENST00000393794 STAG3L1P0CL83 205 aa22.77■■□□□ 1.24
POLR2J-202ENST00000393794 SCG2P13521 617 aa22.77■■□□□ 1.24
POLR2J-202ENST00000393794 UBE3AQ05086 875 aa22.77■■□□□ 1.24
POLR2J-202ENST00000393794 TMEM184AQ6ZMB5 413 aa22.77■■□□□ 1.24
POLR2J-202ENST00000393794 CATIPQ7Z7H3 387 aa22.77■■□□□ 1.24
POLR2J-202ENST00000393794 MB21D2Q8IYB1 491 aaPredicted RBP22.77■■□□□ 1.24
POLR2J-202ENST00000393794 PIBF1Q8WXW3 757 aa22.77■■□□□ 1.24
POLR2J-202ENST00000393794 GLG1Q92896 1179 aa22.77■■□□□ 1.24
POLR2J-202ENST00000393794 CELF4Q9BZC1 486 aaKnown RBP22.77■■□□□ 1.24
POLR2J-202ENST00000393794 JADE2Q9NQC1 790 aa22.77■■□□□ 1.24
POLR2J-202ENST00000393794 ERICH2A1L162 156 aa22.76■■□□□ 1.23
POLR2J-202ENST00000393794 GATMP50440 423 aa22.76■■□□□ 1.23
POLR2J-202ENST00000393794 NCOA7Q8NI08 942 aa22.76■■□□□ 1.23
POLR2J-202ENST00000393794 RRP36Q96EU6 259 aaKnown RBP22.76■■□□□ 1.23
POLR2J-202ENST00000393794 FSCN2O14926 492 aa22.75■■□□□ 1.23
POLR2J-202ENST00000393794 MTMR1Q13613 665 aa22.75■■□□□ 1.23
POLR2J-202ENST00000393794 PAN2Q504Q3 1202 aaKnown RBP22.75■■□□□ 1.23
POLR2J-202ENST00000393794 RBM23Q86U06 439 aaKnown RBP22.75■■□□□ 1.23
POLR2J-202ENST00000393794 NME8Q8N427 588 aa22.75■■□□□ 1.23
POLR2J-202ENST00000393794 SRBD1Q8N5C6 995 aaKnown RBP22.75■■□□□ 1.23
POLR2J-202ENST00000393794 FAM49AQ9H0Q0 323 aaPredicted RBP22.75■■□□□ 1.23
POLR2J-202ENST00000393794 S1PR5Q9H228 398 aa22.75■■□□□ 1.23
POLR2J-202ENST00000393794 PSTPIP2Q9H939 334 aa22.75■■□□□ 1.23
POLR2J-202ENST00000393794 LY9Q9HBG7 655 aa22.75■■□□□ 1.23
POLR2J-202ENST00000393794 SMIM35A0A1B0GVV1 85 aa22.74■■□□□ 1.23
POLR2J-202ENST00000393794 DDAH1O94760 285 aa22.74■■□□□ 1.23
POLR2J-202ENST00000393794 GSPT1P15170 499 aaKnown RBP22.74■■□□□ 1.23
POLR2J-202ENST00000393794 SARSP49591 514 aaKnown RBP22.74■■□□□ 1.23
POLR2J-202ENST00000393794 IGBP1P78318 339 aa22.74■■□□□ 1.23
POLR2J-202ENST00000393794 RBM10P98175 930 aaKnown RBP22.74■■□□□ 1.23
POLR2J-202ENST00000393794 SART3Q15020 963 aaKnown RBP22.74■■□□□ 1.23
POLR2J-202ENST00000393794 PLCB4Q15147 1175 aa22.74■■□□□ 1.23
POLR2J-202ENST00000393794 DUSP6Q16828 381 aa22.74■■□□□ 1.23
POLR2J-202ENST00000393794 PLPPR4Q7Z2D5 763 aa22.74■■□□□ 1.23
POLR2J-202ENST00000393794 SUGP1Q8IWZ8 645 aaKnown RBP22.74■■□□□ 1.23
POLR2J-202ENST00000393794 CDCA3Q99618 268 aaPredicted RBP22.74■■□□□ 1.23
POLR2J-202ENST00000393794 LZTS2Q9BRK4 669 aa22.74■■□□□ 1.23
POLR2J-202ENST00000393794 MTA3Q9BTC8 594 aa22.74■■□□□ 1.23
POLR2J-202ENST00000393794 TLE6Q9H808 572 aa22.74■■□□□ 1.23
POLR2J-202ENST00000393794 MGEA5O60502 916 aa22.73■■□□□ 1.23
POLR2J-202ENST00000393794 ATG7O95352 703 aa22.73■■□□□ 1.23
POLR2J-202ENST00000393794 VCPP55072 806 aaKnown RBP22.73■■□□□ 1.23
POLR2J-202ENST00000393794 ERVFC1P60507 584 aa22.73■■□□□ 1.23
POLR2J-202ENST00000393794 TMEM62Q0P6H9 643 aa22.73■■□□□ 1.23
POLR2J-202ENST00000393794 PAK2Q13177 524 aa22.73■■□□□ 1.23
POLR2J-202ENST00000393794 ZNF654Q8IZM8 581 aa22.73■■□□□ 1.23
POLR2J-202ENST00000393794 RASGRP4Q8TDF6 673 aa22.73■■□□□ 1.23
POLR2J-202ENST00000393794 ERVK-5Q9HDB9 667 aa22.73■■□□□ 1.23
POLR2J-202ENST00000393794 JPH1Q9HDC5 661 aaPredicted RBP22.73■■□□□ 1.23
POLR2J-202ENST00000393794 FAM186AA6NE01 2351 aa22.72■■□□□ 1.23
POLR2J-202ENST00000393794 MYO10Q9HD67 2058 aa22.72■■□□□ 1.23
POLR2J-202ENST00000393794 VPS13AQ96RL7 3174 aa22.72■■□□□ 1.23
POLR2J-202ENST00000393794 PER2O15055 1255 aa22.72■■□□□ 1.23
POLR2J-202ENST00000393794 PLEKHA8P1O95397 391 aa22.72■■□□□ 1.23
POLR2J-202ENST00000393794 AVPR2P30518 371 aa22.72■■□□□ 1.23
POLR2J-202ENST00000393794 TRAPPC12Q8WVT3 735 aa22.72■■□□□ 1.23
POLR2J-202ENST00000393794 TLR9Q9NR96 1032 aa22.72■■□□□ 1.23
POLR2J-202ENST00000393794 RGS18Q9NS28 235 aa22.72■■□□□ 1.23
POLR2J-202ENST00000393794 SLC9A2Q9UBY0 812 aa22.72■■□□□ 1.23
POLR2J-202ENST00000393794 NFASCO94856 1347 aa22.72■■□□□ 1.23
POLR2J-202ENST00000393794 PLXNA3P51805 1871 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 IGKV6D-21A0A0A0MT36 114 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 FSD2A1L4K1 749 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 C9IYK1 514 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 KIF5BP33176 963 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 FAM189BP81408 668 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 PTPN21Q16825 1174 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 PDE12Q6L8Q7 609 aaKnown RBP22.71■■□□□ 1.23
POLR2J-202ENST00000393794 MTHFD1LQ6UB35 978 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 RALYLQ86SE5 291 aaKnown RBP22.71■■□□□ 1.23
POLR2J-202ENST00000393794 CTCFLQ8NI51 663 aaPredicted RBP22.71■■□□□ 1.23
POLR2J-202ENST00000393794 TNPO1Q92973 898 aaKnown RBP22.71■■□□□ 1.23
POLR2J-202ENST00000393794 RPGRIP1Q96KN7 1286 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 MYL10Q9BUA6 226 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 CWH43Q9H720 699 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 KCNH7Q9NS40 1196 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 PCDHA6Q9UN73 950 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 PCDHA8Q9Y5H6 950 aa22.71■■□□□ 1.23
POLR2J-202ENST00000393794 CHMLP26374 656 aa22.7■■□□□ 1.22
POLR2J-202ENST00000393794 NUBP1P53384 320 aa22.7■■□□□ 1.22
POLR2J-202ENST00000393794 KRT76Q01546 638 aa22.7■■□□□ 1.22
POLR2J-202ENST00000393794 SYCE2Q6PIF2 218 aa22.7■■□□□ 1.22
POLR2J-202ENST00000393794 CYP2W1Q8TAV3 490 aa22.7■■□□□ 1.22
POLR2J-202ENST00000393794 TMEM40Q8WWA1 233 aa22.7■■□□□ 1.22
POLR2J-202ENST00000393794 MAP4K1Q92918 833 aa22.7■■□□□ 1.22
POLR2J-202ENST00000393794 CDHR5Q9HBB8 845 aa22.7■■□□□ 1.22
POLR2J-202ENST00000393794 PKD2L1Q9P0L9 805 aa22.7■■□□□ 1.22
POLR2J-202ENST00000393794 SEC63Q9UGP8 760 aaKnown RBP22.7■■□□□ 1.22
POLR2J-202ENST00000393794 LZTS1Q9Y250 596 aa22.7■■□□□ 1.22
POLR2J-202ENST00000393794 PCDHB12Q9Y5F1 795 aa22.7■■□□□ 1.22
POLR2J-202ENST00000393794 EVPLQ92817 2033 aa22.7■■□□□ 1.22
POLR2J-202ENST00000393794 PROB1E7EW31 1015 aa22.69■■□□□ 1.22
POLR2J-202ENST00000393794 M0QZ92 97 aa22.69■■□□□ 1.22
POLR2J-202ENST00000393794 PPFIA3O75145 1194 aa22.69■■□□□ 1.22
POLR2J-202ENST00000393794 FGF18O76093 207 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms