RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 MAP3K20Q9NYL2 800 aaKnown RBP12.12□□□□□ -0.47
CASP3-202ENST00000393585 EPN1Q9Y6I3 576 aaPredicted RBP12.12□□□□□ -0.47
CASP3-202ENST00000393585 CLIC2O15247 247 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 PEX10O60683 326 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 NDUFA10O95299 355 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 ZC2HC1CQ53FD0 456 aaPredicted RBP12.11□□□□□ -0.47
CASP3-202ENST00000393585 MAEAQ7L5Y9 396 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 NIPA1Q7RTP0 329 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 KCTD17Q8N5Z5 321 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 L2HGDHQ9H9P8 463 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 SNCAIPQ9Y6H5 919 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 ASTN1O14525 1302 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 ARHGEF35A5YM69 484 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 CETN3O15182 167 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 NCBP1Q09161 790 aaKnown RBP12.11□□□□□ -0.47
CASP3-202ENST00000393585 KCNMA1Q12791 1236 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 MEA1Q16626 185 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 EDRF1Q3B7T1 1238 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 ARHGAP29Q52LW3 1261 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 FIGNQ5HY92 759 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 NOL9Q5SY16 702 aaKnown RBP12.11□□□□□ -0.47
CASP3-202ENST00000393585 CRACR2AQ9BSW2 395 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 PARVGQ9HBI0 331 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 OLFML3Q9NRN5 406 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 ADAMTS5Q9UNA0 930 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 TFR2Q9UP52 801 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 TRAF3IP3Q9Y228 551 aa12.11□□□□□ -0.47
CASP3-202ENST00000393585 REXO2Q9Y3B8 237 aaKnown RBP12.11□□□□□ -0.47
CASP3-202ENST00000393585 TMEM150BA6NC51 233 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
CASP3-202ENST00000393585 SLU7O95391 586 aaKnown RBP12.1□□□□□ -0.47
CASP3-202ENST00000393585 P4HBP07237 508 aaKnown RBP12.1□□□□□ -0.47
CASP3-202ENST00000393585 CASQ1P31415 396 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 APBA1Q02410 837 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 TRIM59Q8IWR1 403 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 ZC3H3Q8IXZ2 948 aaKnown RBP12.1□□□□□ -0.47
CASP3-202ENST00000393585 ADARB2Q9NS39 739 aaKnown RBP12.1□□□□□ -0.47
CASP3-202ENST00000393585 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.1□□□□□ -0.47
CASP3-202ENST00000393585 A0A1W2PQJ5 194 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 NR3C2P08235 984 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 PLEKP08567 350 aaPredicted RBP12.1□□□□□ -0.47
CASP3-202ENST00000393585 YBX3P16989 372 aaKnown RBP eCLIP12.1□□□□□ -0.47
CASP3-202ENST00000393585 GAP43P17677 238 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 MUTP22033 750 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 UGCGQ16739 394 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 TREML2Q5T2D2 321 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 SAMD3Q8N6K7 520 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 ZNF397Q8NF99 534 aaPredicted RBP12.1□□□□□ -0.47
CASP3-202ENST00000393585 FIZ1Q96SL8 496 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 ZNHIT6Q9NWK9 470 aaKnown RBP12.1□□□□□ -0.47
CASP3-202ENST00000393585 TRIM10Q9UDY6 481 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 MYH11P35749 1972 aa12.1□□□□□ -0.47
CASP3-202ENST00000393585 PDXKO00764 312 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 GNA14O95837 355 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 CASP4P49662 377 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 MARSP56192 900 aaKnown RBP12.09□□□□□ -0.47
CASP3-202ENST00000393585 BMT2Q1RMZ1 405 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 ODR4Q5SWX8 454 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 SULF1Q8IWU6 871 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 FAM178BQ8IXR5 827 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 NEK9Q8TD19 979 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 DCPSQ96C86 337 aaKnown RBP12.09□□□□□ -0.47
CASP3-202ENST00000393585 SYT17Q9BSW7 474 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 TEX13BQ9BXU2 312 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 ZSWIM4Q9H7M6 989 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 NHEJ1Q9H9Q4 299 aaPredicted RBP12.09□□□□□ -0.47
CASP3-202ENST00000393585 A1CFQ9NQ94 594 aaKnown RBP12.09□□□□□ -0.47
CASP3-202ENST00000393585 TYW1Q9NV66 732 aaKnown RBP12.09□□□□□ -0.47
CASP3-202ENST00000393585 PNMA2Q9UL42 364 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 ZMYM2Q9UBW7 1377 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 LRRC53A6NM62 1247 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 TGFB1I1O43294 461 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 CALUO43852 315 aaPredicted RBP12.09□□□□□ -0.47
CASP3-202ENST00000393585 HIP1RO75146 1068 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 AKAP3O75969 853 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 CCNE2O96020 404 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 NR3C1P04150 777 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 ARHGAP25P42331 645 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 OAZ1P54368 228 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 ZNF569Q5MCW4 686 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 PADI6Q6TGC4 694 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 RRAGAQ7L523 313 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 DAW1Q8N136 415 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 NEK11Q8NG66 645 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 NLRC4Q9NPP4 1024 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 TBC1D22BQ9NU19 505 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 WDR90Q96KV7 1748 aa12.09□□□□□ -0.47
CASP3-202ENST00000393585 KIF5CO60282 957 aa12.08□□□□□ -0.47
CASP3-202ENST00000393585 QARSP47897 775 aaKnown RBP12.08□□□□□ -0.47
CASP3-202ENST00000393585 ZNF131P52739 623 aa12.08□□□□□ -0.47
CASP3-202ENST00000393585 MAP3K9P80192 1104 aa12.08□□□□□ -0.47
CASP3-202ENST00000393585 KCNH2Q12809 1159 aa12.08□□□□□ -0.47
CASP3-202ENST00000393585 MAPK7Q13164 816 aa12.08□□□□□ -0.47
CASP3-202ENST00000393585 UTP14CQ5TAP6 766 aaKnown RBP12.08□□□□□ -0.47
CASP3-202ENST00000393585 C9orf131Q5VYM1 1079 aa12.08□□□□□ -0.47
CASP3-202ENST00000393585 VSIG10LQ86VR7 867 aa12.08□□□□□ -0.47
CASP3-202ENST00000393585 CYP39A1Q9NYL5 469 aa12.08□□□□□ -0.47
CASP3-202ENST00000393585 TCEAL9Q9UHQ7 104 aa12.08□□□□□ -0.47
CASP3-202ENST00000393585 SORBS3O60504 671 aa12.08□□□□□ -0.48
CASP3-202ENST00000393585 USO1O60763 962 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms