RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 DGLUCYQ7Z3D6 616 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 MYLK4Q86YV6 388 aaPredicted RBP8.94□□□□□ -0.98
LIMS1-203ENST00000393310 DRC7Q8IY82 874 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 TRIM63Q969Q1 353 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 ITM2BQ9Y287 266 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 SALL3Q9BXA9 1300 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 PITPNM1O00562 1244 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 PRPF40AO75400 957 aaKnown RBP8.94□□□□□ -0.98
LIMS1-203ENST00000393310 PDIA6Q15084 440 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 DAB2IPQ5VWQ8 1189 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 ARMCX5Q6P1M9 558 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 CERS5Q8N5B7 392 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 SEPT1Q8WYJ6 367 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 CRISPLD2Q9H0B8 497 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 TTC12Q9H892 705 aaPredicted RBP8.94□□□□□ -0.98
LIMS1-203ENST00000393310 HELLSQ9NRZ9 838 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 TTC41PQ6P2S7 1318 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 REC8O95072 547 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 PDE4AP27815 886 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 SLC26A2P50443 739 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 SEPT6Q14141 434 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 MFSD10Q14728 455 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 CAVIN1Q6NZI2 390 aaKnown RBP8.93□□□□□ -0.98
LIMS1-203ENST00000393310 NACA2Q9H009 215 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 LRG1P02750 347 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 ERCC5P28715 1186 aaPredicted RBP8.93□□□□□ -0.98
LIMS1-203ENST00000393310 RANBP1P43487 201 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 CEP135Q66GS9 1140 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 ANO2Q9NQ90 1003 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 PRR12Q9ULL5 1215 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 V9GYY5 206 aaPredicted RBP8.93□□□□□ -0.98
LIMS1-203ENST00000393310 PRR33A8MZF0 331 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 ALDH1A2O94788 518 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 PSAPP07602 524 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 TBC1D8BQ0IIM8 1120 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 PLD1Q13393 1074 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 BAATQ14032 418 aaPredicted RBP8.93□□□□□ -0.98
LIMS1-203ENST00000393310 TRIM35Q9UPQ4 493 aa8.93□□□□□ -0.98
LIMS1-203ENST00000393310 CCDC189A1A4V9 331 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 SPDYE16A6NNV3 312 aaPredicted RBP8.92□□□□□ -0.98
LIMS1-203ENST00000393310 hCG_1984214I3L0E3 225 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 ATG13O75143 517 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 TBCAO75347 108 aaKnown RBP8.92□□□□□ -0.98
LIMS1-203ENST00000393310 ZMYND10O75800 440 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 GGPS1O95749 300 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 PGK2P07205 417 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 RHBDL3P58872 404 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 DUSP28Q4G0W2 176 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 MTSS1LQ765P7 747 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 NME8Q8N427 588 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 HDDC3Q8N4P3 179 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 ZNF713Q8N859 430 aaPredicted RBP8.92□□□□□ -0.98
LIMS1-203ENST00000393310 TACO1Q9BSH4 297 aaKnown RBP8.92□□□□□ -0.98
LIMS1-203ENST00000393310 SPG21Q9NZD8 308 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 KLHL42Q9P2K6 505 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 DDX41Q9UJV9 622 aaKnown RBP8.92□□□□□ -0.98
LIMS1-203ENST00000393310 ZNF197O14709 1029 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 FIBPO43427 364 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 PPFIA2O75334 1257 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 EGFRP00533 1210 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 CSF2RAP15509 400 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 FOXO4P98177 505 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 PPARAQ07869 468 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 TMED1Q13445 227 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 TREML2Q5T2D2 321 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 TXNRD3Q86VQ6 643 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 TSPYL6Q8N831 410 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 NXPE3Q969Y0 559 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 PLEKHF1Q96S99 279 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.92□□□□□ -0.98
LIMS1-203ENST00000393310 DDTLA6NHG4 134 aaPredicted RBP8.92□□□□□ -0.98
LIMS1-203ENST00000393310 ATP6V1E1P36543 226 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 ID4P47928 161 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 GJA9P57773 515 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 SMAD4Q13485 552 aaKnown RBP8.92□□□□□ -0.98
LIMS1-203ENST00000393310 GOLGB1Q14789 3259 aaKnown RBP8.92□□□□□ -0.98
LIMS1-203ENST00000393310 PLCB4Q15147 1175 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 LRRC26Q2I0M4 334 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 RABL6Q3YEC7 729 aaPredicted RBP8.92□□□□□ -0.98
LIMS1-203ENST00000393310 PGBD3Q8N328 593 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 SLC7A3Q8WY07 619 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 LARP6Q9BRS8 491 aaKnown RBP8.92□□□□□ -0.98
LIMS1-203ENST00000393310 PDLIM7Q9NR12 457 aa8.92□□□□□ -0.98
LIMS1-203ENST00000393310 TBKBP1A7MCY6 615 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 KIF2AO00139 706 aaPredicted RBP8.91□□□□□ -0.98
LIMS1-203ENST00000393310 CBFA2T2O43439 604 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 TMEM132BQ14DG7 1078 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 MCMDC2Q4G0Z9 681 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 HHATQ5VTY9 493 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 FBXL6Q8N531 539 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 GTF3C6Q969F1 213 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 LRRC27Q9C0I9 530 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 CENPHQ9H3R5 247 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 ETAA1Q9NY74 926 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 TRIOBPQ9H2D6 2365 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 AKAP11Q9UKA4 1901 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 RDH13Q8NBN7 331 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 BICD1Q96G01 975 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 MKNK1Q9BUB5 465 aa8.91□□□□□ -0.98
LIMS1-203ENST00000393310 H0YC42 278 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms