RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 PON1P27169 355 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 ECHS1P30084 290 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 HNRNPH1P31943 449 aaKnown RBP10.92□□□□□ -0.66
COL17A1-203ENST00000393211 HSD17B3P37058 310 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 ATP1A2P50993 1020 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 ERVK-9P63128 1117 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 GPSM2P81274 684 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 HLTFQ14527 1009 aaKnown RBP eCLIP10.92□□□□□ -0.66
COL17A1-203ENST00000393211 NFIXQ14938 502 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 NFIL3Q16649 462 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 UBE2SQ16763 222 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 SKIDA1Q1XH10 827 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 MFSD14BQ5SR56 506 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 H2AFVQ71UI9 128 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 ZNF571Q7Z3V5 609 aaPredicted RBP10.92□□□□□ -0.66
COL17A1-203ENST00000393211 RPAINQ86UA6 219 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 TEX2Q8IWB9 1127 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 NELFCDQ8IXH7 590 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 SYT2Q8N9I0 419 aaPredicted RBP10.92□□□□□ -0.66
COL17A1-203ENST00000393211 TPCN2Q8NHX9 752 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 P3H4Q92791 437 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 KAT2BQ92831 832 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 CABS1Q96KC9 395 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 PACSIN1Q9BY11 444 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 ACTR5Q9H9F9 607 aaPredicted RBP10.92□□□□□ -0.66
COL17A1-203ENST00000393211 GPCPD1Q9NPB8 672 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 TYW1Q9NV66 732 aaKnown RBP10.92□□□□□ -0.66
COL17A1-203ENST00000393211 STXBP5LQ9Y2K9 1186 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 SAMM50Q9Y512 469 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 MYH4Q9Y623 1939 aa10.92□□□□□ -0.66
COL17A1-203ENST00000393211 SART1O43290 800 aaKnown RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 CEP104O60308 925 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 PPP1R11O60927 126 aaPredicted RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 UFL1O94874 794 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 XRCC5P13010 732 aaKnown RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 RPA1P27694 616 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 CDR1P51861 262 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 EIF3BP55884 814 aaKnown RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 JAM2P57087 298 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 GUCY1A3Q02108 690 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 GIT2Q14161 759 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 EPHA7Q15375 998 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 ARSHQ5FYA8 562 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 TTC19Q6DKK2 380 aaPredicted RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 C6orf89Q6UWU4 347 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 PEX26Q7Z412 305 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 KLHL7Q8IXQ5 586 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 ARHGEF1Q92888 912 aaKnown RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 CCDC17Q96LX7 622 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 NAP1L3Q99457 506 aaPredicted RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 TACO1Q9BSH4 297 aaKnown RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 FGFBP2Q9BYJ0 223 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 DNM3Q9UQ16 869 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 QSER1Q2KHR3 1735 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 GMNCA6NCL1 334 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 BBOX1O75936 387 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 TRIM37O94972 964 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 AKR1B1P15121 316 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 GAP43P17677 238 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 CTNNA1P35221 906 aaKnown RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 ARID5AQ03989 594 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 CRY2Q49AN0 593 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 Q4G0T1 1027 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 DPP8Q6V1X1 898 aaPredicted RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 CCDC91Q7Z6B0 441 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 LRRC47Q8N1G4 583 aaKnown RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 METTL13Q8N6R0 699 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 CNBD1Q8NA66 436 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 RPGRQ92834 1020 aaKnown RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 HES6Q96HZ4 224 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 FAM20AQ96MK3 541 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 CNOT10Q9H9A5 744 aaKnown RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 TBC1D7Q9P0N9 293 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 SLC12A6Q9UHW9 1150 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 SERPINB13Q9UIV8 391 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 PACSIN2Q9UNF0 486 aaPredicted RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 NOC2LQ9Y3T9 749 aaKnown RBP10.91□□□□□ -0.66
COL17A1-203ENST00000393211 DAGLAQ9Y4D2 1042 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 CAPN7Q9Y6W3 813 aa10.91□□□□□ -0.66
COL17A1-203ENST00000393211 NCANO14594 1321 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 C5orf60A6NFR6 353 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 POTECB2RU33 542 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 KRIT1O00522 736 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 TRAPPC3O43617 180 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 MED24O75448 989 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 FOSP01100 380 aaPredicted RBP10.9□□□□□ -0.66
COL17A1-203ENST00000393211 CCDC172P0C7W6 258 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 ERCC3P19447 782 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 SLC9A1P19634 815 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 LMNB1P20700 586 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 STAT1P42224 750 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 SMTNP53814 917 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 ACTN3Q08043 901 aaPredicted RBP10.9□□□□□ -0.66
COL17A1-203ENST00000393211 ZNF844Q08AG5 666 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 UAP1Q16222 522 aaPredicted RBP10.9□□□□□ -0.66
COL17A1-203ENST00000393211 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 CROCCP2Q86T23 111 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 NT5DC3Q86UY8 548 aa10.9□□□□□ -0.66
COL17A1-203ENST00000393211 DCAF4Q8WV16 495 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms